RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 SYNPOQ8N3V7 929 aa17.14■□□□□ 0.33
COL16A1-203ENST00000373672 TSNAXQ99598 290 aaKnown RBP17.14■□□□□ 0.33
COL16A1-203ENST00000373672 ZNF442Q9H7R0 627 aa17.14■□□□□ 0.33
COL16A1-203ENST00000373672 ARMC1Q9NVT9 282 aa17.14■□□□□ 0.33
COL16A1-203ENST00000373672 GJD2Q9UKL4 321 aa17.14■□□□□ 0.33
COL16A1-203ENST00000373672 HIF3AQ9Y2N7 669 aa17.14■□□□□ 0.33
COL16A1-203ENST00000373672 LRP8Q14114 963 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 GK3PQ14409 553 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 FAM69BQ5VUD6 431 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 MSANTD3Q96H12 275 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 GMLQ99445 158 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 TMEM246Q9BRR3 403 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 EIF5A2Q9GZV4 153 aaKnown RBP17.13■□□□□ 0.33
COL16A1-203ENST00000373672 C2orf42Q9NWW7 574 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 GPR37L1O60883 481 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 RETP07949 1114 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 THBS2P35442 1172 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 HTR6P50406 440 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 ZNF252P-AS1Q0IIN9 211 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 NDUFAF5Q5TEU4 345 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 FAM205BPQ63HN1 556 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 C12orf76Q8N812 135 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-203ENST00000373672 GPR150Q8NGU9 434 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 CREB3L4Q8TEY5 395 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 C16orf58Q96GQ5 468 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 PEX11GQ96HA9 241 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 FTCDNL1E5RQL4 147 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 ATE1O95260 518 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 CNR2P34972 360 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 ACTBP60709 375 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 ACTG1P63261 375 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 RUNX3Q13761 415 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 ZC3H14Q6PJT7 736 aaKnown RBP17.13■□□□□ 0.33
COL16A1-203ENST00000373672 OR13J1Q8NGT2 312 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 OR5AK2Q8NH90 309 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 TMEM68Q96MH6 324 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 SERINC2Q96SA4 455 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 IL23AQ9NPF7 189 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 PAQR5Q9NXK6 330 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-203ENST00000373672 MITFO75030 526 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-203ENST00000373672 CAPN3P20807 821 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 CD68P34810 354 aaPredicted RBP17.13■□□□□ 0.33
COL16A1-203ENST00000373672 GMPRP36959 345 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 POU3F4P49335 361 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 GRM7Q14831 915 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 RAB6CQ53S08 254 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 MAL2Q969L2 176 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 ARHGAP39Q9C0H5 1083 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 RAB6CQ9H0N0 254 aa17.13■□□□□ 0.33
COL16A1-203ENST00000373672 MRPL15Q9P015 296 aaKnown RBP17.13■□□□□ 0.33
COL16A1-203ENST00000373672 SSX5O60225 188 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 RFPL2O75678 378 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 IVDP26440 423 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 CD34P28906 385 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 LSSP48449 732 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 RNASE10Q5GAN6 216 aaKnown RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 TCTE1Q5JU00 501 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 ATAD3CQ5T2N8 411 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 LARP4Q71RC2 724 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 DOK4Q8TEW6 326 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 ARHGAP9Q9BRR9 750 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 KLHL9Q9P2J3 617 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 SUSD2Q9UGT4 822 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 RARRES3Q9UL19 164 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 IGKV6D-21A0A0A0MT36 114 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 MRPS14O60783 128 aaKnown RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 TOXO94900 526 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 PRSS56P0CW18 603 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 NTSR1P30989 418 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 CDKN2CP42773 168 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 CLDN10P78369 228 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 MLC1Q15049 377 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 PLXDC1Q8IUK5 500 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 MS4A4EQ96PG1 132 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 DPCDQ9BVM2 203 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 C8orf33Q9H7E9 229 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 NMNAT1Q9HAN9 279 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 BTNL2Q9UIR0 455 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 PLATP00750 562 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 PPP5CP53041 499 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 FOXK1P85037 733 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 NFATC3Q12968 1075 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 SLC22A10Q63ZE4 541 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 TP53INP2Q8IXH6 220 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 LRRC46Q96FV0 321 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 KLHL15Q96M94 604 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 ZBTB20Q9HC78 741 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 UBE2J1Q9Y385 318 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 PHRF1Q9P1Y6 1649 aaKnown RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 H3BUI4 141 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 CSF2RAP15509 400 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 AKR1C4P17516 323 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 PITPNBP48739 271 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 RSU1Q15404 277 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 ZNF551Q7Z340 670 aaPredicted RBP17.12■□□□□ 0.33
COL16A1-203ENST00000373672 METTL25Q8N6Q8 603 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 OR6Q1Q8NGQ2 317 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 ZDHHC1Q8WTX9 485 aa17.12■□□□□ 0.33
COL16A1-203ENST00000373672 TEPSINQ96N21 525 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms