RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 MAP3K3Q99759 626 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 CDH20Q9HBT6 801 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 KCNIP1Q9NZI2 227 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 IFNA2P01563 188 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 STSP08842 583 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 MAL2Q969L2 176 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 CCNL2Q96S94 520 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-202ENST00000355480 MAGIXQ9H6Y5 334 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 GDE1Q9NZC3 331 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 HSPB11Q9Y547 144 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 SPO11Q9Y5K1 396 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 OR52A4PA6NMU1 304 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 GNAO1P09471 354 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 PIGGQ5H8A4 983 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 NRMQ8IXM6 262 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 ACTR10Q9NZ32 417 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 TRAPPC13A5PLN9 417 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 A6NL46 340 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 EIF3FO00303 357 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-202ENST00000355480 KIAA0355O15063 1070 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 ZNF888P0CJ79 500 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-202ENST00000355480 ZNF182P17025 639 aaPredicted RBP17.12■□□□□ 0.33
COL18A1-202ENST00000355480 SFTPDP35247 375 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 FNTBP49356 437 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 ZXDBP98169 803 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 ZNF45Q02386 682 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 SPHARQ15513 63 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 TRAPPC6BQ86SZ2 158 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 MGLLQ99685 303 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 SYT4Q9H2B2 425 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 REV1Q9UBZ9 1251 aa17.12■□□□□ 0.33
COL18A1-202ENST00000355480 FGL2Q14314 439 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 PLBD1Q6P4A8 553 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 CYS1Q717R9 158 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 GALNT6Q8NCL4 622 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 NELL2Q99435 816 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 ENTPD2Q9Y5L3 495 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 LILRB3O75022 631 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 MPP2Q14168 576 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 CTC1Q2NKJ3 1217 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 ISCA2Q86U28 154 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 ZFP41Q8N8Y5 198 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 LSM14AQ8ND56 463 aaKnown RBP17.11■□□□□ 0.33
COL18A1-202ENST00000355480 OR6C4Q8NGE1 309 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 POTEKPQ9BYX7 375 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 ISPDA4D126 451 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 CNOT4O95628 575 aaKnown RBP17.11■□□□□ 0.33
COL18A1-202ENST00000355480 IFNA5P01569 189 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 FESP07332 822 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 CLDN2P57739 230 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 TMEM151AQ8N4L1 468 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 ISOC1Q96CN7 298 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 L3HYPDHQ96EM0 354 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 TMEM185BQ9H7F4 350 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 IL26Q9NPH9 171 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 SCGB2A1O75556 95 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 HTR6P50406 440 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 RHEBQ15382 184 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 RABEPKQ7Z6M1 372 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 SYNPOQ8N3V7 929 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 RBM24Q9BX46 236 aaKnown RBP17.11■□□□□ 0.33
COL18A1-202ENST00000355480 RPH3AQ9Y2J0 694 aaPredicted RBP17.11■□□□□ 0.33
COL18A1-202ENST00000355480 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 C17orf105B2RV13 164 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 I3L521 148 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 TLE3Q04726 772 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 SCD5Q86SK9 330 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 RCBTB1Q8NDN9 531 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 SFXN2Q96NB2 322 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 MS4A4EQ96PG1 132 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 ACAD8Q9UKU7 415 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 HIF3AQ9Y2N7 669 aa17.11■□□□□ 0.33
COL18A1-202ENST00000355480 WDR5P61964 334 aaKnown RBP17.1■□□□□ 0.33
COL18A1-202ENST00000355480 UGT2A3Q6UWM9 527 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 CNMDO75829 334 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 ZNF28P17035 718 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 RPS3P23396 243 aaKnown RBP eCLIP17.1■□□□□ 0.332e-8■■■□□ 17.7
COL18A1-202ENST00000355480 ITGB7P26010 798 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 ELMOD2Q8IZ81 293 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 IL20RAQ9UHF4 553 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 H3BML4 177 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 LYSMD4Q5XG99 296 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 Q8N402 240 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 OR4K5Q8NGD3 323 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 ZNF420Q8TAQ5 688 aaPredicted RBP17.1■□□□□ 0.33
COL18A1-202ENST00000355480 FEVQ99581 238 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 HINT2Q9BX68 163 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 XRN1Q8IZH2 1706 aaKnown RBP17.1■□□□□ 0.33
COL18A1-202ENST00000355480 A0A0J9YY10 115 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 A0A0U1RQS6 177 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 PCDH17O14917 1159 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 UCHL1P09936 223 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 GGT1P19440 569 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 NR0B2Q15466 257 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 RPS26P11Q5JNZ5 115 aaPredicted RBP17.1■□□□□ 0.33
COL18A1-202ENST00000355480 PRAMEF8Q5VWM4 474 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 PRAMEF7Q5VXH5 474 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 BAIAP2L2Q6UXY1 529 aa17.1■□□□□ 0.33
COL18A1-202ENST00000355480 PRR22Q8IZ63 422 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms