RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 RNH1P13489 461 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 HOXA6P31267 233 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 ZNF311Q5JNZ3 666 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 TSPYL5Q86VY4 417 aaPredicted RBP20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 SPATA5L1Q9BVQ7 753 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 BTBD2Q9BX70 525 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 KCND3Q9UK17 655 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 LIPT1Q9Y234 373 aa20.96■□□□□ 0.95
PDLIM2-203ENST00000339162 A0A087WXM4 84 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 TRIM64A6NGJ6 449 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 DUXAA6NLW8 204 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 PCDHGA12O60330 932 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 OR10H2O60403 315 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 CDH2P19022 906 aaPredicted RBP20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 HMGA2P52926 109 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 COLEC12Q5KU26 742 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 C6orf141Q5SZD1 244 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 PIK3R3Q92569 461 aa20.95■□□□□ 0.94
PDLIM2-203ENST00000339162 DUX1O43812 170 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 CCNB2O95067 398 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 NSA2O95478 260 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 ARL4DP49703 201 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 RPP38P78345 283 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 HPCAP84074 193 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 FAM53BQ14153 422 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 SEC23BQ15437 767 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 HEPHL1Q6MZM0 1159 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 RBM44Q6ZP01 1051 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 WDR5BQ86VZ2 330 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 MAML2Q8IZL2 1156 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 PRMT8Q9NR22 394 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 PAPOLBQ9NRJ5 636 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 PILRBQ9UKJ0 227 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 GPR55Q9Y2T6 319 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 TMEM150CB9EJG8 249 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 PLOD3O60568 738 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 LGI1O95970 557 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 ALPPP05187 535 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 CD1CP29017 333 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 SIGLEC14Q08ET2 396 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 CCDC71Q8IV32 467 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 AQP11Q8NBQ7 271 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 NDRG4Q9ULP0 352 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 A4GNTQ9UNA3 340 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 CHST2Q9Y4C5 530 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 DSPPQ9NZW4 1301 aa20.94■□□□□ 0.94
PDLIM2-203ENST00000339162 TECTAO75443 2155 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 CLDN24A6NM45 220 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 HRKO00198 91 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 HRO43593 1189 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 GASTP01350 101 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 SLC35E2P0CK97 266 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 ANXA8P13928 327 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 MAOAP21397 527 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 ALAS2P22557 587 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 CRHBPP24387 322 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 TUBA4AP68366 448 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 STX4Q12846 297 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 PLK5Q496M5 336 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 TCTE1Q5JU00 501 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 FRRS1Q6ZNA5 592 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 TTLL10Q6ZVT0 673 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 PLXDC1Q8IUK5 500 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 CD180Q99467 661 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 NUDT22Q9BRQ3 303 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 RASSF1Q9NS23 344 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 FBXO34Q9NWN3 711 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 SLC9A8Q9Y2E8 581 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 HCN4Q9Y3Q4 1203 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 CENPVL1A0A0U1RR11 272 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 OR2B3O76000 313 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 RYKP34925 604 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 RNF144AP50876 292 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 HSD11B2P80365 405 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 PIGFQ07326 219 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 CDK5R2Q13319 367 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 KEAP1Q14145 624 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 LSRQ86X29 649 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 BPIFB6Q8NFQ5 453 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 CCDC74AQ96AQ1 378 aa20.93■□□□□ 0.94
PDLIM2-203ENST00000339162 A0A087WV62 115 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 CCDC160A6NGH7 325 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 H1F0P07305 194 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 ELAVL4P26378 380 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 EPHA8P29322 1005 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 AVPR1BP47901 424 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 SKP1P63208 163 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 HOXC5Q00444 222 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 IL18R1Q13478 541 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 GPR68Q15743 365 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 NPTX1Q15818 432 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 PRAMEF8Q5VWM4 474 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 PRAMEF7Q5VXH5 474 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 TYW3Q6IPR3 259 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 ZC3H14Q6PJT7 736 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 NLGN4XQ8N0W4 816 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 VWA5B2Q8N398 1253 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 CLIP4Q8N3C7 705 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 OR52R1Q8NGF1 315 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 OR51Q1Q8NH59 317 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms