RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 HEPACAM2A8MVW5 462 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 EEDO75530 441 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 NDUFB2O95178 105 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 DNASE1L3Q13609 305 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 LTB4RQ15722 352 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ATP6AP1Q15904 470 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 EXOC3L2Q2M3D2 409 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TRMT10BQ6PF06 316 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 KLHDC10Q6PID8 442 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 HAGHLQ6PII5 290 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CBARPQ8N350 705 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 C4orf32Q8N8J7 132 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TMEM178AQ8NBL3 297 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 OR7G2Q8NG99 324 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 KCNE4Q8WWG9 221 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 GAB3Q8WWW8 586 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TANKQ92844 425 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SLC45A3Q96JT2 553 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 EGLN1Q9GZT9 426 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 PCDHGA8Q9Y5G5 932 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 OR51F1A6NGY5 319 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 INMT-MINDY4F8WBC2 141 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 GPR171O14626 319 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TSPAN4O14817 238 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 IL1AP01583 271 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 UCHL1P09936 223 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CELP19835 753 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 BMP6P22004 513 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CHRNA4P43681 627 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 THBS3P49746 956 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 RAB33AQ14088 237 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 UPP1Q16831 310 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF423Q2M1K9 1284 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 XKR5Q6UX68 686 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 PDZD3Q86UT5 571 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 BOLLQ8N9W6 283 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 OR13C3Q8NGS6 347 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TOX2Q96NM4 488 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 PREBQ9HCU5 417 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CARD8Q9Y2G2 431 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ANKRD33BA6NCL7 494 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 H3BNC9 293 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SHOXO15266 292 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 BCAS1O75363 584 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CPNE6O95741 557 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 AHSGP02765 367 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 C8orf89P0DMQ9 161 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TMEM225BP0DP42 221 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CHRM1P11229 460 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 EDNRBP24530 442 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ACVRL1P37023 503 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SNCAP37840 140 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 XCR1P46094 333 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 F2RL1P55085 397 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF616Q08AN1 781 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 LMAN2Q12907 356 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CATR1Q13166 79 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 BTBD16Q32M84 506 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CNPY1Q3B7I2 92 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CES4AQ5XG92 561 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 GDPGP1Q6ZNW5 385 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 VTCN1Q7Z7D3 282 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TPRA1Q86W33 373 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ERI1Q8IV48 349 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF417Q8TAU3 575 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ENKD1Q9H0I2 346 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 APOBEC3GQ9HC16 384 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 HSFX1Q9UBD0 423 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ZNF223Q9UK11 482 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 COCHO43405 550 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 RGS9O75916 674 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CD48P09326 243 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ACPPP15309 386 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 AOC1P19801 751 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TUBG1P23258 451 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ATP1B3P54709 279 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TAS2R20P59543 309 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 MEF2DQ14814 521 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 ODF4Q2M2E3 257 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 HNRNPA1L2Q32P51 320 aaKnown RBP3.87□□□□□ -1.79
SCN3A-201ENST00000283254 C6orf136Q5SQH8 315 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 AKR1C8PQ5T2L2 129 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CCNJQ5T5M9 372 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 EEF1A1P5Q5VTE0 462 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 LPCAT4Q643R3 524 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SLC6A19Q695T7 634 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 EPGNQ6UW88 154 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 NXPE4Q6UWF7 544 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CD300LGQ6UXG3 332 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 KIF18BQ86Y91 864 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 DNAJC22Q8N4W6 341 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SLC37A3Q8NCC5 494 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 NUP43Q8NFH3 380 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 NXPE3Q969Y0 559 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CHFRQ96EP1 664 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 TSSK2Q96PF2 358 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 PFDN5Q99471 154 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 SGIP1Q9BQI5 828 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 CHIAQ9BZP6 476 aa3.87□□□□□ -1.79
SCN3A-201ENST00000283254 GPATCH2Q9NW75 528 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms