RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ABHD15Q6UXT9 468 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 LBX2Q6XYB7 198 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 ANKRD46Q86W74 232 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 CCDC117Q8IWD4 279 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 CHST13Q8NET6 341 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 ZMIZ1Q9ULJ6 1067 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PCDHB10Q9UN67 800 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 POLR3HQ9Y535 204 aaPredicted RBP8.72□□□□□ -1.01
PDGFC-201ENST00000274071 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
PDGFC-201ENST00000274071 ADRB3P13945 408 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 ACPPP15309 386 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 CASP9P55211 416 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 CDC42P60953 191 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 HNRNPKP61978 463 aaKnown RBP eCLIP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 C1DQ13901 141 aaKnown RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 LBHQ53QV2 105 aaPredicted RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 ZRANB3Q5FWF4 1079 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 RPL13AP3Q6NVV1 102 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 H3F3CQ6NXT2 135 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 SLC27A1Q6PCB7 646 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 ALKAL1Q6UXT8 129 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 LDB1Q86U70 411 aaPredicted RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 FAM131BQ86XD5 332 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 GPR135Q8IZ08 494 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 SYNPOQ8N3V7 929 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 OR56B4Q8NH76 319 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 ORAI1Q96D31 301 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 C7orf34Q96L11 122 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 TEFMQ96QE5 360 aaKnown RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 IL4I1Q96RQ9 567 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 ATOH8Q96SQ7 321 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 CPPED1Q9BRF8 314 aaPredicted RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 METTL9Q9H1A3 318 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 SEMA6CQ9H3T2 930 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 NXF3Q9H4D5 531 aaKnown RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 MINDY3Q9H8M7 445 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 TREX1Q9NSU2 369 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 NKIRAS2Q9NYR9 191 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 GALPQ9UBC7 116 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 RPS6KB2Q9UBS0 482 aa8.71□□□□□ -1.01
PDGFC-201ENST00000274071 SF3B6Q9Y3B4 125 aaKnown RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 SPIN1Q9Y657 262 aaPredicted RBP8.71□□□□□ -1.01
PDGFC-201ENST00000274071 A0A0A6YYC8 382 aaPredicted RBP8.71□□□□□ -1.02
PDGFC-201ENST00000274071 SHISA3A0PJX4 238 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 I3L1I5 382 aaPredicted RBP8.71□□□□□ -1.02
PDGFC-201ENST00000274071 SLC7A4O43246 635 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 CCR7P32248 378 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 CDKN2CP42773 168 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 FABP5Q01469 135 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 ILF3Q12906 894 aaKnown RBP eCLIP8.71□□□□□ -1.02
PDGFC-201ENST00000274071 PPIGQ13427 754 aaKnown RBP eCLIP8.71□□□□□ -1.02
PDGFC-201ENST00000274071 PEA15Q15121 130 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 ATP13A5Q4VNC0 1218 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 MZT2AQ6P582 158 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 B3GLCTQ6Y288 498 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 MOB3CQ70IA8 216 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 HDDC3Q8N4P3 179 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 OR10G2Q8NGC3 310 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 OR52J3Q8NH60 311 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 DNAJB8Q8NHS0 232 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 RNF139Q8WU17 664 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 VOPP1Q96AW1 172 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 OR4K3Q96R72 315 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 ABHD1Q96SE0 405 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 ZPBPQ9BS86 351 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 RSRP1Q9BUV0 290 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 EGLN1Q9GZT9 426 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 TOLLIPQ9H0E2 274 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 OPN3Q9H1Y3 402 aaPredicted RBP8.71□□□□□ -1.02
PDGFC-201ENST00000274071 XKR8Q9H6D3 395 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 ELP3Q9H9T3 547 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 RASL12Q9NYN1 266 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 MGAT4CQ9UBM8 478 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 TSPAN16Q9UKR8 245 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 UBQLN1Q9UMX0 589 aaKnown RBP8.71□□□□□ -1.02
PDGFC-201ENST00000274071 TP53TG5Q9Y2B4 290 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 POFUT2Q9Y2G5 429 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 GSTK1Q9Y2Q3 226 aa8.71□□□□□ -1.02
PDGFC-201ENST00000274071 WDR90Q96KV7 1748 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 OR6C74A6NCV1 312 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 NCF1BA6NI72 391 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 NCF1CA8MVU1 366 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PSMD9O00233 223 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SLC19A2O60779 497 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 CILPO75339 1184 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 KRT33AO76009 404 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 AQP8O94778 261 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 C1QCP02747 245 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 ATXN1LP0C7T5 689 aaKnown RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 UQCRC2P22695 453 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PDHA2P29803 388 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SLC6A4P31645 630 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 KDELR2P33947 212 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 BLOC1S1P78537 153 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SLC14A1Q13336 389 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PAFAH1B3Q15102 231 aaKnown RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 UQCC3Q6UW78 93 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LHFPL3Q86UP9 236 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms