RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 FRMPD2BQ6IN97 320 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 CAPN13Q6MZZ7 669 aaPredicted RBP13.43□□□□□ -0.26
SCARF1-201ENST00000263071 ALKAL2Q6UX46 152 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 KLHDC8BQ8IXV7 354 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 CMTM8Q8IZV2 173 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 OR2T4Q8NH00 348 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 NFKBIDQ8NI38 313 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 FUBP3Q96I24 572 aaKnown RBP eCLIP13.43□□□□□ -0.26
SCARF1-201ENST00000263071 CCM2Q9BSQ5 444 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 AIPO00170 330 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 LRRTM2O43300 516 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 XPAP23025 273 aaPredicted RBP13.43□□□□□ -0.26
SCARF1-201ENST00000263071 SNRPEP62304 92 aaKnown RBP13.43□□□□□ -0.26
SCARF1-201ENST00000263071 TNFRSF17Q02223 184 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 PUM1Q14671 1186 aaKnown RBP eCLIP13.43□□□□□ -0.26
SCARF1-201ENST00000263071 OPCMLQ14982 345 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 RBMS2Q15434 407 aaKnown RBP13.43□□□□□ -0.26
SCARF1-201ENST00000263071 MPEG1Q2M385 716 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 COX20Q5RI15 118 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 PRAMEF13Q5VWM6 474 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 SHQ1Q6PI26 577 aaKnown RBP13.43□□□□□ -0.26
SCARF1-201ENST00000263071 PTCHD4Q6ZW05 846 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 DPPA2Q7Z7J5 298 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 MOSPD2Q8NHP6 518 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 SORCS1Q8WY21 1168 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 DUSP26Q9BV47 211 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 KCNH6Q9H252 994 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 SLC32A1Q9H598 525 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 KCNK7Q9Y2U2 307 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 ARHGEF33A8MVX0 844 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 E7EQ34 232 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 YY2O15391 372 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 SPP1P10451 314 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 GPX4P36969 197 aaPredicted RBP13.42□□□□□ -0.26
SCARF1-201ENST00000263071 TSPAN5P62079 268 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 EXOC3L2Q2M3D2 409 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 C3orf33Q6P1S2 294 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 USP53Q70EK8 1073 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 DUSP18Q8NEJ0 188 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 OR2T35Q8NGX2 323 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 WDR20Q8TBZ3 569 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 MAP3K3Q99759 626 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 SERHLQ9NQF3 203 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 NEUROG3Q9Y4Z2 214 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 OARD1Q9Y530 152 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 PDCD11Q14690 1871 aaKnown RBP13.42□□□□□ -0.26
SCARF1-201ENST00000263071 TMEM202A6NGA9 273 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 CXCL14O95715 111 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 ZDHHC11BP0C7U3 371 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 EBLN1P0CF75 366 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 G0S2P27469 103 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 LCN1P31025 176 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 XKP51811 444 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 DEF8Q6ZN54 512 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 GPR155Q7Z3F1 870 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 TRMT11Q7Z4G4 463 aaKnown RBP13.42□□□□□ -0.26
SCARF1-201ENST00000263071 KLHL36Q8N4N3 616 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 RAB8BQ92930 207 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 PAWRQ96IZ0 340 aaKnown RBP13.42□□□□□ -0.26
SCARF1-201ENST00000263071 PCDHB1Q9Y5F3 818 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 GPR37O15354 613 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 SSNA1O43805 119 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 CDRT1O95170 752 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 KCNK5O95279 499 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 HOXA9P31269 272 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 PRKAG1P54619 331 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 MBTPS1Q14703 1052 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 KIAA0040Q15053 153 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 NCEH1Q6PIU2 408 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 MMP21Q8N119 569 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 ELP5Q8TE02 316 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 SLC38A2Q96QD8 506 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 BARHL1Q9BZE3 327 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 PLXNA1Q9UIW2 1896 aa13.42□□□□□ -0.26
SCARF1-201ENST00000263071 SIX6O95475 246 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 CD53P19397 219 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 PSMA1P25786 263 aaKnown RBP13.41□□□□□ -0.26
SCARF1-201ENST00000263071 SPAM1P38567 509 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 CLDN8P56748 225 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 PON3Q15166 354 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 GLYR1Q49A26 553 aaPredicted RBP13.41□□□□□ -0.26
SCARF1-201ENST00000263071 OR7E24Q6IFN5 339 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 RGS7BPQ6MZT1 257 aaPredicted RBP13.41□□□□□ -0.26
SCARF1-201ENST00000263071 CXorf57Q6NSI4 855 aaKnown RBP13.41□□□□□ -0.26
SCARF1-201ENST00000263071 ZFP41Q8N8Y5 198 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 EDARADDQ8WWZ3 215 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 ELAC1Q9H777 363 aaKnown RBP13.41□□□□□ -0.26
SCARF1-201ENST00000263071 EVA1AQ9H8M9 152 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 ANKRA2Q9H9E1 313 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 MED11Q9P086 117 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 COMMD3Q9UBI1 195 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 ABT1Q9ULW3 272 aaKnown RBP13.41□□□□□ -0.26
SCARF1-201ENST00000263071 LOC105369274A0A096LPK9 316 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 PRMT3O60678 531 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 C6orf47O95873 294 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 ADH1CP00326 375 aa13.41□□□□□ -0.26
SCARF1-201ENST00000263071 PAICSP22234 425 aaKnown RBP13.41□□□□□ -0.26
SCARF1-201ENST00000263071 ACRV1P26436 265 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms