RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
NIP7-201ENST00000254940 C9orf16Q9BUW7 83 aa11.3□□□□□ -0.6
NIP7-201ENST00000254940 VN1R1Q9GZP7 353 aa11.3□□□□□ -0.6
NIP7-201ENST00000254940 PNO1Q9NRX1 252 aaKnown RBP11.3□□□□□ -0.6
NIP7-201ENST00000254940 SIRT5Q9NXA8 310 aa11.3□□□□□ -0.6
NIP7-201ENST00000254940 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
NIP7-201ENST00000254940 WASF3Q9UPY6 502 aa11.3□□□□□ -0.6
NIP7-201ENST00000254940 ZNF451Q9Y4E5 1061 aa11.3□□□□□ -0.6
NIP7-201ENST00000254940 DLGAP3O95886 979 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 IFNA16P05015 189 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 CALRP27797 417 aaKnown RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 PRKAG1P54619 331 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 C10orf62Q5T681 223 aaPredicted RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 CPZQ66K79 652 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 MSANTD1Q6ZTZ1 278 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 METTL25Q8N6Q8 603 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 DNAJB8Q8NHS0 232 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 DCBLD2Q96PD2 775 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 WFDC6Q9BQY6 131 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 OSBPL11Q9BXB4 747 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 SERHL2Q9H4I8 314 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 BATF3Q9NR55 127 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 PRTFDC1Q9NRG1 225 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 LANCL2Q9NS86 450 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 ATAD3AQ9NVI7 634 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 CDC14AQ9UNH5 594 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 H0YIG0 161 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 STMND1H3BQB6 276 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 DEAF1O75398 565 aaPredicted RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 E2F6O75461 281 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 TNFRSF21O75509 655 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 ALPLP05186 524 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 PRKAR1AP10644 381 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 FCGR1AP12314 374 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 RNF144AP50876 292 aaPredicted RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 PGDP52209 483 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 IL1RL1Q01638 556 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 EEF1A2Q05639 463 aaKnown RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 KRT80Q6KB66 452 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 TSEN54Q7Z6J9 526 aaKnown RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 ZDHHC13Q8IUH4 622 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 NLGN4XQ8N0W4 816 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 HORMAD2Q8N7B1 307 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 NLGN4YQ8NFZ3 816 aaPredicted RBP11.29□□□□□ -0.6
NIP7-201ENST00000254940 TNIP2Q8NFZ5 429 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 ARSGQ96EG1 525 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 MUS81Q96NY9 551 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 CRB3Q9BUF7 120 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
NIP7-201ENST00000254940 PRAMEF27A3QJZ7 478 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 CDRT15L2A8MXV6 281 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 IDSB3KWA1 339 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 J3KTA2 159 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 M0QX08 132 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 TLX3O43711 291 aaPredicted RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 HEXBP07686 556 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 WT1P19544 449 aaPredicted RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 DCTP40126 519 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 PRIM2P49643 509 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 XKP51811 444 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 STX4Q12846 297 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 TP53BP2Q13625 1128 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 HEPACAMQ14CZ8 416 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 NSDHLQ15738 373 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 SLC36A3Q495N2 470 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 IRAK1BP1Q5VVH5 260 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 R3HCC1LQ7Z5L2 792 aaKnown RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 ZNF321PQ8N8H1 164 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 OR52J3Q8NH60 311 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 NKD1Q969G9 470 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 ALOXE3Q9BYJ1 711 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 SPRY4Q9C004 299 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 GRIP2Q9C0E4 1043 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 Q9H521 79 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 SIRT3Q9NTG7 399 aaPredicted RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 LYARQ9NX58 379 aaKnown RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 SMPD3Q9NY59 655 aaPredicted RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 ZNF639Q9UID6 485 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 ADAM29Q9UKF5 820 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 C9J4A7 227 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 PDPK1O15530 556 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 TFAP2AP05549 437 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 CELA2AP08217 269 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 CYP4B1P13584 511 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 ELK4P28324 431 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 EPHA2P29317 976 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 SOX18P35713 384 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 PEX19P40855 299 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 PCBP4P57723 403 aaKnown RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 TXNL4AP83876 142 aaKnown RBP11.28□□□□□ -0.6
NIP7-201ENST00000254940 NCF4Q15080 339 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 FAM111BQ6SJ93 734 aa11.28□□□□□ -0.6
NIP7-201ENST00000254940 OR9A2Q8NGT5 310 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms