RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Prrt4B2RU40 902 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm6351K9J7D1 481 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Dgcr6O35347 198 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 KeraO35367 351 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Elovl3O35949 271 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Prl7a1O54830 266 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 PrkacaP05132 351 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zfp26P10076 861 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nr5a2P45448 560 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ube2iP63280 158 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fgf11P70378 225 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 2410002F23RikQ3TE80 284 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 St8sia1Q64687 355 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 SargQ8BI29 606 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Znf787Q8BIF9 381 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 R3hcc1lQ8BJM3 775 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pp2d1Q8BVT6 620 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gpr157Q8C206 330 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Casc3Q8K3W3 698 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zc3h10Q8R205 435 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Osgin1Q8VC10 478 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 FggQ8VCM7 436 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pla2g15Q8VEB4 412 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr850Q8VFF2 315 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nkd1Q99MH6 471 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rnf111Q99ML9 989 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Msantd3Q9CR78 275 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ift27Q9D0P8 186 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Stx11Q9D3G5 287 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pnp2Q9D8C9 305 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Bco1Q9JJS6 566 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vps29Q9QZ88 182 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Mnx1Q9QZW9 404 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Clcn2Q9R0A1 908 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Notch4P31695 1964 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fam84bD3YXJ5 310 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmed7D3YZZ5 224 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm3149E9PW52 257 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm21103E9Q2Q1 267 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm3476K7N6V0 257 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm8362K7N6Y6 257 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gp5O08742 567 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 H2-AaP01910 256 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ggta1P23336 394 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Htr5bP31387 370 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rps15aP62245 130 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Med22Q62276 200 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Lrit2Q6PFC5 549 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Snx32Q80ZJ7 404 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Wdr48Q8BH57 676 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ing4Q8C0D7 249 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ston1Q8CDJ8 730 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Hmgcs1Q8JZK9 520 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cuedc1Q8R3V6 388 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr441Q8VFS5 310 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pcdhb3Q91XZ7 784 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Imp3Q921Y2 184 aaKnown RBP6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 IqchQ9D2K4 1071 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Atp5dQ9D3D9 168 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 OtoglF7A4A7 2325 aa6.51□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr521E9Q519 321 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zfp619G3X9T2 1161 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm8857L7N291 182 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm6614M0QWR8 670 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Map2k3O09110 347 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Aff2O55112 1272 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Chst3O88199 472 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 AvpP35455 168 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cd9P40240 226 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Zic1P46684 447 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vbp1P61759 196 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 PtnP63089 168 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Csnk2bP67871 215 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Csrp1P97315 193 aaKnown RBP6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmem248Q3TBN1 314 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Spc25Q3UA16 226 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Cdk15Q3V3A1 433 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Bbs1Q3V3N7 593 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 ClpbQ60649 677 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Abhd10Q6PE15 297 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Chst10Q6PGK7 356 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rslcan18Q7M6X5 460 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rbm11Q80YT9 238 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Amigo2Q80ZD9 519 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Tmem198Q8BG75 360 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfml2aQ8BHP7 681 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 4933430I17RikQ8BHW4 495 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Rfpl4aQ8VH31 287 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Pcdha8Q91Y12 946 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Unc50Q9CQ61 259 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Ssr3Q9DCF9 185 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Nek6Q9ES70 313 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Dbf4Q9QZ41 663 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Gm20911A0A087WSS0 222 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Sult2a7A0A1B0GRF0 313 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Slc9a6A1L3P4 702 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Fndc7A2AED3 737 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Vmn2r125D3Z3M1 369 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Olfr564E9PWA8 316 aa6.5□□□□□ -1.37
Bdnf-201ENSMUST00000053317 Prdm14E9Q3T6 561 aa6.5□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms