RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ASPDHA6ND91 283 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 SCN2BO60939 215 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 TFAP2AP05549 437 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 BMP2P12643 396 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 HSD17B1P14061 328 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 MMP11P24347 488 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 FRKP42685 505 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 PGDP52209 483 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 NR1H2P55055 460 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 TUBA4AP68366 448 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 MRPS22P82650 360 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 EEF1A2Q05639 463 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 BNIP2Q12982 314 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 SRSF6Q13247 344 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 SSPNQ14714 243 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 AP1ARQ63HQ0 302 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 REP15Q6BDI9 236 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 TMEM205Q6UW68 189 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 DGAT2L6Q6ZPD8 337 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 MSANTD1Q6ZTZ1 278 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 CPEB2Q7Z5Q1 589 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 CHERPQ8IWX8 916 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ANKFN1Q8N957 763 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 SNIP1Q8TAD8 396 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 KAT2AQ92830 837 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 RIT1Q92963 219 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ITCHQ96J02 903 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 INPP5KQ9BT40 448 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ADAP2Q9NPF8 381 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 BTNL2Q9UIR0 455 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 LEF1Q9UJU2 399 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 AP4S1Q9Y587 144 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 CLCA3PQ9Y6N3 262 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 CCDC88CQ9P219 2028 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 NUP210LQ5VU65 1888 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 ITPR1Q14643 2758 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 SYNDIG1LA6NDD5 238 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 C17orf105B2RV13 164 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 RFXANKO14593 260 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 KLK10O43240 276 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 DYRK3O43781 588 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 CREG1O75629 220 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 CLPTM1O96005 669 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 ATP1B1P05026 303 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 EIF2S3P41091 472 aaKnown RBP13.48□□□□□ -0.25
LINC00339-208ENST00000634934 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
LINC00339-208ENST00000634934 HBA1P69905 142 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 IL10RAQ13651 578 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF267Q14586 743 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-208ENST00000634934 ELAVL1Q15717 326 aaKnown RBP13.48□□□□□ -0.25
LINC00339-208ENST00000634934 PAGE3Q5JUK9 113 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 TMEM107Q6UX40 140 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 DNAJC14Q6Y2X3 702 aaPredicted RBP13.48□□□□□ -0.25
LINC00339-208ENST00000634934 GALNT12Q8IXK2 581 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 MAGED4Q96JG8 741 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 PANX1Q96RD7 426 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 NPAS2Q99743 824 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 PKP2Q99959 881 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 TRIM15Q9C019 465 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 TAS2R9Q9NYW1 312 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 SNX8Q9Y5X2 465 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 HS3ST3B1Q9Y662 390 aa13.48□□□□□ -0.25
LINC00339-208ENST00000634934 TRIM64CA6NLI5 447 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 FBP2O00757 339 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 MRASO14807 208 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-208ENST00000634934 GSNP06396 782 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 ITPKBP27987 946 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 SOAT1P35610 550 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 POLE2P56282 527 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 LRRC74AQ0VAA2 488 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 MLC1Q15049 377 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 SPDYE7PQ495Y7 208 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 INTS11Q5TA45 600 aaKnown RBP13.47□□□□□ -0.25
LINC00339-208ENST00000634934 CPZQ66K79 652 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 FAM111BQ6SJ93 734 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF621Q6ZSS3 439 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 SZRD1Q7Z422 152 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 PPP1R32Q7Z5V6 425 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 RETREG3Q86VR2 466 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 CARM1Q86X55 608 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 RAB43Q86YS6 212 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 PTPMT1Q8WUK0 201 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-208ENST00000634934 GTF2H4Q92759 462 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 CNPPD1Q9BV87 410 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 CXorf21Q9HAI6 301 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 IL1RL2Q9HB29 575 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 SERHLQ9NQF3 203 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 TUBA8Q9NY65 449 aaPredicted RBP13.47□□□□□ -0.25
LINC00339-208ENST00000634934 UBAP1Q9NZ09 502 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 MAT2BQ9NZL9 334 aa13.47□□□□□ -0.25
LINC00339-208ENST00000634934 PKD1L2Q7Z442 2459 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 TRIM64A6NGJ6 449 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 SOCS6O14544 535 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 PCDH17O14917 1159 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 STAMBPO95630 424 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 NPPAP01160 153 aa13.46□□□□□ -0.25
LINC00339-208ENST00000634934 CT62P0C5K7 136 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms