RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TRIML2Q8N7C3 387 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 STEAP2Q8NFT2 490 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 OR52E1Q8NGJ3 308 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 OR2T34Q8NGX1 318 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 EXOC6Q8TAG9 804 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 AGAP11Q8TF27 550 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CCDC51Q96ER9 411 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 C7orf34Q96L11 122 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CATSPER2Q96P56 530 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 NAP1L3Q99457 506 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CCT7Q99832 543 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 EDEM2Q9BV94 578 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 RAB33BQ9H082 229 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 GLT8D2Q9H1C3 349 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 HAUS4Q9H6D7 363 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 HPS4Q9NQG7 708 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 PNPLA3Q9NST1 481 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 CLEC5AQ9NY25 188 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 SPG21Q9NZD8 308 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 B4GALT7Q9UBV7 327 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 TRMT6Q9UJA5 497 aaKnown RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF346Q9UL40 294 aaKnown RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 SATB2Q9UPW6 733 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 MRPS7Q9Y2R9 242 aaKnown RBP3.27□□□□□ -1.89
BRCA1-229ENST00000621897 KLK4Q9Y5K2 254 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 COMMD3-BMI1R4GMX3 469 aa3.27□□□□□ -1.89
BRCA1-229ENST00000621897 UBE4BO95155 1302 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ACEP12821 1306 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 SALL1Q9NSC2 1324 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 A0A087WZY1 265 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 C15orf38-AP3S2A0A0A6YYH1 394 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 FAM47DPA6NHR8 397 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 SDR42E2A6NKP2 422 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 TMEM150CB9EJG8 249 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 F8VZ95 297 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 INPP4BO15327 924 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 CTAG2O75638 210 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 RHBDL1O75783 438 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 RHOBTB1O94844 696 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 OR6B1O95007 311 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 SEMA4FO95754 770 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 THY1P04216 161 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 IVLP07476 585 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 VIMP08670 466 aaKnown RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 STAG3L3P0CL85 134 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 C8orf89P0DMQ9 161 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ANXA8P13928 327 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF3P17036 446 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 GOT1P17174 413 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 CHMLP26374 656 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 NF2P35240 595 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 LONP1P36776 959 aaKnown RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 CDX1P47902 265 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 RIDAP52758 137 aaKnown RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 UCP2P55851 309 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ATP5IP56385 69 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 MAP3K7CLP57077 242 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 CARD18P57730 90 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 GCKRQ14397 625 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 KARSQ15046 597 aaKnown RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 RCN1Q15293 331 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 CEBPEQ15744 281 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ANXA8L1Q5VT79 327 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 TTC19Q6DKK2 380 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 CES3Q6UWW8 571 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 MACC1Q6ZN28 852 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 TOM1L2Q6ZVM7 507 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 Q71RC1 249 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ABI3BPQ7Z7G0 1075 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF410Q86VK4 478 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 COMTD1Q86VU5 262 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 CCDC83Q8IWF9 413 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 KRT222Q8N1A0 295 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ZNF321PQ8N8H1 164 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 SLC26A7Q8TE54 656 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 ITLN1Q8WWA0 313 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 LRRC39Q96DD0 335 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 NSMCE2Q96MF7 247 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 SIKE1Q9BRV8 207 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 MTG1Q9BT17 334 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 INPP5KQ9BT40 448 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 OSBPL8Q9BZF1 889 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 GPR61Q9BZJ8 451 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 STRADBQ9C0K7 418 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 NACA2Q9H009 215 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 C5orf66Q9H5L9 145 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 AKIRIN1Q9H9L7 192 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-229ENST00000621897 WDR41Q9HAD4 459 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 KCNK13Q9HB14 408 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 PALMDQ9NP74 551 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 KCNN3Q9UGI6 736 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 GMEB2Q9UKD1 530 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 AUP1Q9Y679 476 aa3.26□□□□□ -1.89
BRCA1-229ENST00000621897 GAKO14976 1311 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 MYO3BQ8WXR4 1341 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 A0A0U1RQS6 177 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 A0A1B0GTH9 108 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 C2orf92A0A1B0GVN3 265 aa3.25□□□□□ -1.89
BRCA1-229ENST00000621897 C5orf52A6NGY3 159 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms