RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 LUZP2Q86TE4 346 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 LCORQ96JN0 433 aaPredicted RBP16.27■□□□□ 0.2
SMN2-213ENST00000614240 GPR78Q96P69 363 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 NODALQ96S42 347 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 TM9SF2Q99805 663 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 TUBA1CQ9BQE3 449 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 ITPAQ9BY32 194 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 GALNT9Q9HCQ5 603 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 DLL4Q9NR61 685 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 FETUBQ9UGM5 382 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 PSME2Q9UL46 239 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 SLC12A4Q9UP95 1085 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 DTX4Q9Y2E6 619 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 RPH3AQ9Y2J0 694 aaPredicted RBP16.27■□□□□ 0.2
SMN2-213ENST00000614240 PCDHA9Q9Y5H5 950 aa16.27■□□□□ 0.2
SMN2-213ENST00000614240 NAV3Q8IVL0 2385 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 C1orf226A1L170 272 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 HMX2A2RU54 273 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 CASKO14936 926 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 SNPHO15079 494 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 ACOX3O15254 700 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 SMIM24O75264 130 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 CBR3O75828 277 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 GOSR1O95249 250 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 FREM3P0C091 2139 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 RHOXF2BP0C7M4 288 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 CPN1P15169 458 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 S1PR1P21453 382 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 CNTFP26441 200 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 PHBP35232 272 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 ALDH9A1P49189 494 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 MAP4K2Q12851 820 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 SNTA1Q13424 505 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 PRICKLE4Q2TBC4 344 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 TECRLQ5HYJ1 363 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 DESI1Q6ICB0 168 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 SLC48A1Q6P1K1 146 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 COMMD6Q7Z4G1 85 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 TRIM42Q8IWZ5 723 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 METTL4Q8N3J2 472 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 WFDC11Q8NEX6 87 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 ADCY4Q8NFM4 1077 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 HGDQ93099 445 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 INTS12Q96CB8 462 aaKnown RBP16.26■□□□□ 0.19
SMN2-213ENST00000614240 KLHL29Q96CT2 875 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 ZFP3Q96NJ6 502 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 NTMT1Q9BV86 223 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 SFXN3Q9BWM7 321 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 PLEKHF2Q9H8W4 249 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 EHD3Q9NZN3 535 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 JKAMPQ9P055 326 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 PRODH2Q9UF12 536 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 PYCARDQ9ULZ3 195 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 TMCO1Q9UM00 188 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 EXO1Q9UQ84 846 aaKnown RBP16.26■□□□□ 0.19
SMN2-213ENST00000614240 ACANP16112 2415 aa16.26■□□□□ 0.19
SMN2-213ENST00000614240 PRAMEF25A6NGN4 478 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 ALDOAP04075 364 aaKnown RBP16.25■□□□□ 0.19
SMN2-213ENST00000614240 ATP1B1P05026 303 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 CASQ1P31415 396 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 SLCO1A2P46721 670 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 DCAF7P61962 342 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 GUCY2DQ02846 1103 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 FOXF2Q12947 444 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 BIVMQ86UB2 503 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 OR52R1Q8NGF1 315 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 TRPC4APQ8TEL6 797 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 SLC44A1Q8WWI5 657 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 ANP32BQ92688 251 aaKnown RBP16.25■□□□□ 0.19
SMN2-213ENST00000614240 ISL2Q96A47 359 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 TMCO6Q96DC7 493 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 DTNBP1Q96EV8 351 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 DACH2Q96NX9 599 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 NSUN5Q96P11 429 aaKnown RBP16.25■□□□□ 0.19
SMN2-213ENST00000614240 FAIM2Q9BWQ8 316 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 ACBD3Q9H3P7 528 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 PFDN4Q9NQP4 134 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 GALNT8Q9NY28 637 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 MAT2BQ9NZL9 334 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 PCTPQ9UKL6 214 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 PLLPQ9Y342 182 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 ZNF780BQ9Y6R6 833 aa16.25■□□□□ 0.19
SMN2-213ENST00000614240 SH3D21A4FU49 640 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 STX16-NPEPL1H3BU86 382 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 STX16O14662 325 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 UGT2B11O75310 529 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 REM1O75628 298 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 RCBTB2O95199 551 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 ESRRBO95718 433 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 DRD5P21918 477 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 ADSLP30566 484 aaPredicted RBP16.24■□□□□ 0.19
SMN2-213ENST00000614240 SOX18P35713 384 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 STARP49675 285 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 DIO3P55073 304 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 TRAF3Q13114 568 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 TMEM81Q6P7N7 255 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 SCIMPQ6UWF3 145 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 IFNEQ86WN2 208 aa16.24■□□□□ 0.19
SMN2-213ENST00000614240 PLD6Q8N2A8 252 aaKnown RBP16.24■□□□□ 0.19
SMN2-213ENST00000614240 OR4F6Q8NGB9 312 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms