RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ENDOUP21128 410 aaKnown RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PBX2P40425 430 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SCGB2A2Q13296 93 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 UBE2UQ5VVX9 321 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 LHPPQ9H008 270 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 NLKQ9UBE8 527 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 A0A0G2JLL6 359 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 MTNR1AP48039 350 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PRRT2Q7Z6L0 340 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 OR6C4Q8NGE1 309 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 OR56B2PQ8NGI1 322 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 NDNFQ8TB73 568 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 WDR20Q8TBZ3 569 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 ZFP57Q9NU63 452 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 YIPF1Q9Y548 306 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 ACRV1P26436 265 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SLAMF1Q13291 335 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 FBXL18Q96ME1 805 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 HDHD5Q9BXW7 423 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SC5DO75845 299 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 NIPAL4Q0D2K0 466 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 MLC1Q15049 377 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 GALNT10Q86SR1 603 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CELF5Q8N6W0 485 aaKnown RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 NUP43Q8NFH3 380 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 LILRB5O75023 590 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CNTN5O94779 1100 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 NDUFV2P19404 249 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 MSX1P28360 303 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SERINC3Q13530 473 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 RNASE10Q5GAN6 216 aaKnown RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 ALDH16A1Q8IZ83 802 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 GATSQ8NAP1 163 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 GOLM1Q8NBJ4 401 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SLC35F5Q8WV83 523 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF559Q9BR84 538 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 TUBG2Q9NRH3 451 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 DNMT3AQ9Y6K1 912 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 ZNF541Q9H0D2 1346 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 A0A1B0GUL6 1792 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 OXSR1O95747 527 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PPP5CP53041 499 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 DEFB115Q30KQ5 88 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CCDC116Q8IYX3 515 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 LRRC25Q8N386 305 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 FBRSL1Q9HCM7 1045 aaKnown RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 RPS10P5Q9NQ39 176 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 MYOFQ9NZM1 2061 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 hCG_1807616A0A1W2PRN6 198 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 A8MVJ9 347 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 VSX2P58304 361 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 TBPL1P62380 186 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CYCSP99999 105 aaKnown RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 OGDHQ02218 1023 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PCGF3Q3KNV8 242 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CHADLQ6NUI6 762 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 HMGN2P46Q86SG4 172 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 OR8K5Q8NH50 307 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 ACOT13Q9NPJ3 140 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 REV1Q9UBZ9 1251 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 H3BUI4 141 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 EMC8O43402 210 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SCO2O43819 266 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 PRKACAP17612 351 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 FASLGP48023 281 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 RAB31Q13636 194 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CES4AQ5XG92 561 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 C3P1Q6ZMU1 363 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 KLHL9Q9P2J3 617 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 B4GALT7Q9UBV7 327 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 POLR2AP24928 1970 aaKnown RBP9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SCN9AQ15858 1988 aa9.17□□□□□ -0.94
CSMD1-217ENST00000602723 SDHDO14521 159 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SLC35E2BP0CK96 405 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CYP8B1Q9UNU6 501 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 EP300Q09472 2414 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 A0A0D9SEW6 157 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SHOXO15266 292 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SLC34A2O95436 690 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 RFC2P35250 354 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ZC3H14Q6PJT7 736 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 HACD2Q6Y1H2 254 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TSPYL5Q86VY4 417 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TMEM173Q86WV6 379 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 BEST4Q8NFU0 473 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 RRNAD1Q96FB5 475 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SIGLEC10Q96LC7 697 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CPNE5Q9HCH3 593 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 C2orf42Q9NWW7 574 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PHYHO14832 338 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TSPAN6O43657 245 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 POU3F4P49335 361 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 RGS6P49758 472 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 MC2RQ01718 297 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 MINDY1Q8N5J2 469 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms