RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RUNDC3BQ96NL0 473 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ARPC5LQ9BPX5 153 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 ERP44Q9BS26 406 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 CAPS2Q9BXY5 557 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 MS4A8Q9BY19 250 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TTTY12Q9BZ98 90 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 OR51B5Q9H339 312 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 EHD1Q9H4M9 534 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 IFT22Q9H7X7 185 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 GALNT8Q9NY28 637 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 TUBA8Q9NY65 449 aaPredicted RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 GRHL1Q9NZI5 618 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 COQ3Q9NZJ6 369 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 NTMQ9P121 344 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 MRPS33Q9Y291 106 aaKnown RBP5.74□□□□□ -1.49
NUP88-212ENST00000576708 CLCA3PQ9Y6N3 262 aa5.74□□□□□ -1.49
NUP88-212ENST00000576708 A0A088AWK7 358 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 A0A1W2PS29 197 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SH3D21A4FU49 640 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 GLOD5A6NK44 160 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SUPT3HB4E1H0 165 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SUPT3HO75486 399 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 GLSO94925 669 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 NADKO95544 446 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 RFPL3SP0C7P2 107 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SLC35E2BP0CK96 405 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ZNF10P21506 573 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 CNR1P21554 472 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 HIST1H1TP22492 207 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 CPN2P22792 545 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 CHRNB4P30926 498 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 CASP2P42575 452 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SSR2P43308 183 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 RAB10P61026 200 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ATP6V0D1P61421 351 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 TFF3Q07654 80 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 TGM3Q08188 693 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 FOXO1Q12778 655 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 CALCOCO2Q13137 446 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SLAMF1Q13291 335 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SNTB1Q13884 538 aaKnown RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 SLMAPQ14BN4 828 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ZKSCAN8Q15776 578 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 TBCCQ15814 346 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 HIST2H2ACQ16777 129 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 AP5B1Q2VPB7 878 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 KBTBD12Q3ZCT8 623 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 UBAP2Q5T6F2 1119 aaKnown RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 FAM219BQ5XKK7 198 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 C18orf63Q68DL7 685 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 HIST2H2AA3Q6FI13 130 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 RTL6Q6ICC9 239 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 TMEM211Q6ICI0 200 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 OR4C11Q6IEV9 310 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 MED27Q6P2C8 311 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ARHGAP11AQ6P4F7 1023 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ZDHHC24Q6UX98 284 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 RTL4Q6ZR62 310 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 FAM47EQ6ZV65 393 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 RAPH1Q70E73 1250 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 LRRC70Q7Z2Q7 622 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 CCDC25Q86WR0 208 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 LIX1LQ8IVB5 337 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 C9orf40Q8IXQ3 194 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 GPALPP1Q8IXQ4 340 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 C17orf53Q8N3J3 647 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 LINC01356Q8N9X3 169 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 MORN4Q8NDC4 146 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 OR7G3Q8NG95 312 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 OR5M3Q8NGP4 307 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 OR14A16Q8NHC5 309 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 LILRB4Q8NHJ6 448 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ZNF721Q8TF20 911 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 KCTD4Q8WVF5 259 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 RND1Q92730 232 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 DAZLQ92904 295 aaKnown RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 NXNL1Q96CM4 212 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 C14orf79Q96F83 325 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SENP5Q96HI0 755 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 KCNC2Q96PR1 638 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SMC6Q96SB8 1091 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ATOH8Q96SQ7 321 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 MYCBPQ99417 103 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 CPNE1Q99829 537 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 TREX2Q9BQ50 279 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 SPATA25Q9BR10 227 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 TBCDQ9BTW9 1192 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 EFCAB11Q9BUY7 163 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 CNPPD1Q9BV87 410 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 PITHD1Q9GZP4 211 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 TP63Q9H3D4 680 aaPredicted RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 ZMAT4Q9H898 229 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ZDHHC11Q9H8X9 412 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 CNOT10Q9H9A5 744 aaKnown RBP5.73□□□□□ -1.49
NUP88-212ENST00000576708 MCCC2Q9HCC0 563 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 LYRM4Q9HD34 91 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ALKBH4Q9NXW9 302 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 NSMCE4AQ9NXX6 385 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 TXNDC16Q9P2K2 825 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 SPRR3Q9UBC9 169 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms