RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 PRKRAO75569 313 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 NEBLO76041 1014 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 AP2A2O94973 939 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NXPH2O95156 264 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 KLHL2O95198 593 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 POP4O95707 220 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 MT-ND2P03891 347 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CAPN1P07384 714 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 FAM106CPP0CH98 169 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NPIPA8P0DM63 369 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 RNH1P13489 461 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 DARSP14868 501 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 ETS2P15036 469 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NCK1P16333 377 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SRMP19623 302 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NT5EP21589 574 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PCMT1P22061 227 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CALML3P27482 149 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 LAP3P28838 519 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CD1CP29017 333 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 RBMS1P29558 406 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 OTX1P32242 354 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 NAMPTP43490 491 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 NKX2-1P43699 371 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 CSNK1EP49674 416 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 FHITP49789 147 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 DNA2P51530 1060 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CCR4P51679 360 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ATP1B3P54709 279 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 GP2P55259 537 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 RAG2P55895 527 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 DAOAP59103 153 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ZP1P60852 638 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 BASP1P80723 227 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 MRPS6P82932 125 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 BDH1Q02338 343 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ID2Q02363 134 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 LGALS3BPQ08380 585 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 FUT7Q11130 342 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PNRC1Q12796 327 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 CNTN1Q12860 1018 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SLAQ13239 276 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ORC2Q13416 577 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 PKP1Q13835 747 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CRMP1Q14194 572 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CTTNQ14247 550 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 NCF4Q15080 339 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SF3B4Q15427 424 aaKnown RBP eCLIP1.86□□□□□ -2.11
RTF1-207ENST00000561076 OR1C1Q15619 314 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 EZH2Q15910 746 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 EXT1Q16394 746 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 CALCRLQ16602 461 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MICBQ29980 383 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 KLHL38Q2WGJ6 581 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SNAI3Q3KNW1 292 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 GLYR1Q49A26 553 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 VPS26BQ4G0F5 336 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 TMEM119Q4V9L6 283 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 FAM74A3Q4VXF1 159 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 TCHHL1Q5QJ38 904 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 WASHC2DQ5SRD0 308 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 BEND3Q5T5X7 828 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SUSD4Q5VX71 490 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SLX4IPQ5VYV7 408 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 KIAA0895LQ68EN5 471 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 ATL3Q6DD88 541 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 DMKNQ6E0U4 476 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 OR4F3Q6IEY1 312 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SLC8B1Q6J4K2 584 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PYHIN1Q6K0P9 492 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SLC25A25Q6KCM7 469 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 TRNP1Q6NT89 227 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 C8orf74Q6P047 294 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 BHLHB9Q6PI77 547 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 PARM1Q6UWI2 310 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 TREML4Q6UXN2 200 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 Q6ZRG5 221 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 C19orf35Q6ZS72 473 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 Q6ZTK2 550 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 STXBP4Q6ZWJ1 553 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 Q71RC1 249 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 RHOUQ7L0Q8 258 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 G2E3Q7L622 706 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 H2BFWTQ7Z2G1 175 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 TRMT1LQ7Z2T5 733 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 COX8CQ7Z4L0 72 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 AMIGO2Q86SJ2 522 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MOB3BQ86TA1 216 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 VRK2Q86Y07 508 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MARCH9Q86YJ5 346 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MMAAQ8IVH4 418 aaKnown RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 C1orf210Q8IVY1 113 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 SLC35F2Q8IXU6 374 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 MUC20Q8N307 709 aaPredicted RBP1.86□□□□□ -2.11
RTF1-207ENST00000561076 KLHDC1Q8N7A1 406 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 TCEANCQ8N8B7 351 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 FNDC5Q8NAU1 212 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 DMBX1Q8NFW5 382 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 OR2AK2Q8NG84 335 aa1.86□□□□□ -2.11
RTF1-207ENST00000561076 OR7A2PQ8NGA2 310 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms