RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 BICRALQ6AI39 1079 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 RTL4Q6ZR62 310 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 WDR75Q8IWA0 830 aaKnown RBP12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 ST6GALNAC3Q8NDV1 305 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 FAM13CQ8NE31 585 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 DNAJB8Q8NHS0 232 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 TP53INP1Q96A56 240 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 SPACA9Q96E40 222 aaPredicted RBP12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 OSGIN2Q9Y236 505 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 KLF13Q9Y2Y9 288 aaPredicted RBP12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 NPFFR2Q9Y5X5 522 aa12.74□□□□□ -0.37
TSPAN3-205ENST00000558745 FAM166BA8MTA8 275 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 KLRC4-KLRK1H3BQV0 150 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 UPK1AO00322 258 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 CDK2AP1O14519 115 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 PDPK1O15530 556 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 HS6ST1O60243 411 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 SEMA7AO75326 666 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 PDE9AO76083 593 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 UNC5CO95185 931 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 FBXO45P0C2W1 286 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 EDN3P14138 238 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 CNR1P21554 472 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 NTSP30990 170 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 CDK9P50750 372 aaKnown RBP12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 INAQ16352 499 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 ATG16L1Q676U5 607 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 GFRALQ6UXV0 394 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 NPSR1Q6W5P4 371 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 SIAH3Q8IW03 269 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 GPALPP1Q8IXQ4 340 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 SAMD14Q8IZD0 417 aaPredicted RBP12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 TAGAPQ8N103 731 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 SLC15A4Q8N697 577 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 OR2M7Q8NG81 312 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 OR4N2Q8NGD1 307 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 OR52N2Q8NGI0 321 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 ELP4Q96EB1 424 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 LCORQ96JN0 433 aaPredicted RBP12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 DEFB127Q9H1M4 99 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 FOLH1BQ9HBA9 442 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 PROK2Q9HC23 129 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 SH2D2AQ9NP31 389 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 SACM1LQ9NTJ5 587 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 SEC14L3Q9UDX4 400 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 ATP6V1HQ9UI12 483 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 EIF3LQ9Y262 564 aaKnown RBP12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 GPR55Q9Y2T6 319 aaPredicted RBP12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 NINQ8N4C6 2090 aa12.73□□□□□ -0.37
TSPAN3-205ENST00000558745 C2orf72A6NCS6 295 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 SDHDO14521 159 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 SCAMP2O15127 329 aaKnown RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 PLOD3O60568 738 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 TBX19O60806 448 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 P04436 131 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 PRPS2P11908 318 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 ABCD3P28288 659 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 MAPK1P28482 360 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 EPHA3P29320 983 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 PPICP45877 212 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 ASMTP46597 345 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 PRKAG1P54619 331 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 MANFP55145 182 aaKnown RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 NME5P56597 212 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 ELOAQ14241 798 aaKnown RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 SLC22A10Q63ZE4 541 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 FAM47EQ6ZV65 393 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 LARP4Q71RC2 724 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■□□□□ 9.8
TSPAN3-205ENST00000558745 MAVSQ7Z434 540 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 HOMEZQ8IX15 550 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 FAM98AQ8NCA5 519 aaKnown RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 PAQR8Q8TEZ7 354 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 SGCZQ96LD1 299 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 VSTM2LQ96N03 204 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 MEAF6Q9HAF1 191 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 SLCO1B3Q9NPD5 702 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 TUBA8Q9NY65 449 aaPredicted RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 PRODH2Q9UF12 536 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 CNOT11Q9UKZ1 510 aaKnown RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 C19orf53Q9UNZ5 99 aaPredicted RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 CFL2Q9Y281 166 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 CHCHD2Q9Y6H1 151 aaPredicted RBP12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 POLEQ07864 2286 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 NOTCH2Q04721 2471 aa12.72□□□□□ -0.37
TSPAN3-205ENST00000558745 HMGB1P1B2RPK0 211 aaPredicted RBP12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 BCAS2O75934 225 aaPredicted RBP12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 SNUPNO95149 360 aaKnown RBP12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 ABCB1P08183 1280 aaPredicted RBP12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 RNF224P0DH78 156 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 CT45A8P0DMV1 189 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 CT45A9P0DMV2 189 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 ZNF24P17028 368 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 LBPP18428 481 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 DRD5P21918 477 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 GPC1P35052 558 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 HPCAL1P37235 193 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 PPP2R2AP63151 447 aa12.71□□□□□ -0.37
TSPAN3-205ENST00000558745 PLGLB1Q02325 96 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms