RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 HOOK3Q86VS8 718 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 CCDC83Q8IWF9 413 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 LINC01555Q8NAE3 123 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 RFESDQ8TAC1 157 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 FNDC8Q8TC99 324 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 TEKT1Q969V4 418 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 SLC25A38Q96DW6 304 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 EPSTI1Q96J88 318 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 RTBDNQ9BSG5 229 aaPredicted RBP2.13□□□□□ -2.07
SNX6-204ENST00000555541 HCAR1Q9BXC0 346 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 ZNF350Q9GZX5 532 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 NAPBQ9H115 298 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 NRN1Q9NPD7 142 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 HPS4Q9NQG7 708 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 DDX28Q9NUL7 540 aaKnown RBP2.13□□□□□ -2.07
SNX6-204ENST00000555541 SLC2A6Q9UGQ3 507 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 KLK12Q9UKR0 248 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 PDE10AQ9Y233 779 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 ITM2BQ9Y287 266 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 KIF7Q2M1P5 1343 aa2.13□□□□□ -2.07
SNX6-204ENST00000555541 NPIPA5A0A0B4J1W7 369 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 C13orf42A0A1B0GVH6 325 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 NPIPA5E9PKD4 350 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 SH2D1BO14796 132 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ALOX5P09917 674 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 CCDC166P0CW27 439 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 UGT1A6P19224 532 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 STIP1P31948 543 aaKnown RBP2.12□□□□□ -2.07
SNX6-204ENST00000555541 ST8SIA6P61647 398 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 RBP5P82980 135 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 STXBP2Q15833 593 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ZIC1Q15915 447 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 PRR4Q16378 134 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 MEP1BQ16820 701 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 HKDC1Q2TB90 917 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 DCAF4L1Q3SXM0 396 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ANKRD20A4Q4UJ75 823 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ANKRD20A8PQ5CZ79 823 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 CCDC158Q5M9N0 1113 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ANKRD20A2Q5SQ80 823 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 SPATA46Q5T0L3 261 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ANKRD20A1Q5TYW2 823 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ANKRD20A3Q5VUR7 823 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 GBP6Q6ZN66 633 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 ASRGL1Q7L266 308 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 CADM2Q8N3J6 435 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 SIDT2Q8NBJ9 832 aaKnown RBP2.12□□□□□ -2.07
SNX6-204ENST00000555541 MRPL53Q96EL3 112 aaKnown RBP2.12□□□□□ -2.07
SNX6-204ENST00000555541 JPH2Q9BR39 696 aaPredicted RBP2.12□□□□□ -2.07
SNX6-204ENST00000555541 UTP14AQ9BVJ6 771 aaKnown RBP2.12□□□□□ -2.07
SNX6-204ENST00000555541 FUNDC2Q9BWH2 189 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 GANQ9H2C0 597 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 EHD1Q9H4M9 534 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 NEU3Q9UQ49 428 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 SLC9A8Q9Y2E8 581 aa2.12□□□□□ -2.07
SNX6-204ENST00000555541 A0A0U1RQK1 487 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 EEF2KO00418 725 aaKnown RBP2.11□□□□□ -2.07
SNX6-204ENST00000555541 REC8O95072 547 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 H2AFZP0C0S5 128 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 PSG2P11465 335 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 FUT3P21217 361 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 OR3A4PP47883 348 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 GEMP55040 296 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 RPS8P62241 208 aaKnown RBP2.11□□□□□ -2.07
SNX6-204ENST00000555541 EPC2Q52LR7 807 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 XKR4Q5GH76 650 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 TFDP3Q5H9I0 405 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 TCHHL1Q5QJ38 904 aaPredicted RBP2.11□□□□□ -2.07
SNX6-204ENST00000555541 KCTD11Q693B1 232 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 IRGCQ6NXR0 463 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 CDC42EP5Q6NZY7 148 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 ATRAIDQ6UW56 229 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 FAM47EQ6ZV65 393 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 PIWIL3Q7Z3Z3 882 aaKnown RBP2.11□□□□□ -2.07
SNX6-204ENST00000555541 VSIG1Q86XK7 387 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 FAM46BQ96A09 425 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 PLEKHF1Q96S99 279 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 TSPY26PQ9H489 355 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 LEF1Q9UJU2 399 aaPredicted RBP2.11□□□□□ -2.07
SNX6-204ENST00000555541 SYNJ2O15056 1496 aa2.11□□□□□ -2.07
SNX6-204ENST00000555541 ARHGAP21Q5T5U3 1957 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 CA11O75493 328 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 HOXB7P09629 217 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 MAT2AP31153 395 aaKnown RBP2.1□□□□□ -2.07
SNX6-204ENST00000555541 SERPINB6P35237 376 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 SLC26A2P50443 739 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 BFSP1Q12934 665 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 EBI3Q14213 229 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 HERPUD1Q15011 391 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 ZNF528Q3MIS6 628 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 AGBL2Q5U5Z8 902 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 STHQ8IWL8 128 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 CLYBLQ8N0X4 340 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 SRSF12Q8WXF0 261 aaKnown RBP2.1□□□□□ -2.07
SNX6-204ENST00000555541 RPGRIP1Q96KN7 1286 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 DDX50Q9BQ39 737 aaKnown RBP2.1□□□□□ -2.07
SNX6-204ENST00000555541 RNPEPL1Q9HAU8 725 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 MAGEF1Q9HAY2 307 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 ZNF221Q9UK13 617 aa2.1□□□□□ -2.07
SNX6-204ENST00000555541 RAB26Q9ULW5 256 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms