RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF490Q9ULM2 529 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-217ENST00000541578 PAPPA2Q9BXP8 1791 aa3.71□□□□□ -1.82
SNHG1-217ENST00000541578 CUL9Q8IWT3 2517 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 A0A087WZ39 114 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 IQCMA0A1B0GVH7 501 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 A0A1B0GWJ7 208 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 PRR23AA6NEV1 266 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 NKX6-3A6NJ46 265 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 A8MUI8 341 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 FGF17O60258 216 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 LRP3O75074 770 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 SAP30O75446 220 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 TRMUO75648 421 aaKnown RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 CDC123O75794 336 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 CALCAP01258 141 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 VTNP04004 478 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 CA3P07451 260 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ANOS1P23352 680 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 HOXD10P28358 340 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 CCR4P51679 360 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 GBX2P52951 348 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 PMP22Q01453 160 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 RBBP5Q15291 538 aaKnown RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 EXT1Q16394 746 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 C3AR1Q16581 482 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 CCDC57Q2TAC2 916 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 SLC36A3Q495N2 470 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 FAM106AQ4KMX7 169 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 WDR38Q5JTN6 314 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 LIPKQ5VXJ0 399 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 LRRC8BQ6P9F7 803 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 RBMS3Q6XE24 437 aaKnown RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 SLC26A9Q7LBE3 791 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 C5orf24Q7Z6I8 188 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ZER1Q7Z7L7 766 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 VPS36Q86VN1 386 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 C17orf64Q86WR6 236 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 KBTBD3Q8NAB2 608 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ICA1LQ8NDH6 482 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 OR4C3Q8NH37 302 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 GPR148Q8TDV2 347 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 SAP25Q8TEE9 199 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ZNF606Q8WXB4 792 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 TMEM37Q8WXS4 190 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 SMPDL3AQ92484 453 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 NCLNQ969V3 563 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 TMEM45BQ96B21 275 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 MRPL53Q96EL3 112 aaKnown RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 CCDC51Q96ER9 411 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 GIMAP5Q96F15 307 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 NECTIN4Q96NY8 510 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ERGIC2Q96RQ1 377 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 TSPAN18Q96SJ8 248 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 CRACR2AQ9BSW2 395 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 NUSAP1Q9BXS6 441 aaKnown RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 WWP1Q9H0M0 922 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 RPAP3Q9H6T3 665 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 COG4Q9H9E3 785 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 RAI14Q9P0K7 980 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ATXN10Q9UBB4 475 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 EPHA6Q9UF33 1036 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ATP6V1HQ9UI12 483 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 DIMT1Q9UNQ2 313 aaKnown RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 MRPS7Q9Y2R9 242 aaKnown RBP3.7□□□□□ -1.82
SNHG1-217ENST00000541578 MFHAS1Q9Y4C4 1052 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 ANGPTL3Q9Y5C1 460 aa3.7□□□□□ -1.82
SNHG1-217ENST00000541578 COL6A3P12111 3177 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 TRIOBPQ9H2D6 2365 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 UBR2Q8IWV8 1755 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 hCG_38984A0A1B0GV85 526 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 ARPC1BO15143 372 aaKnown RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 MAGEB3O15480 346 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 MLNRO43193 412 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 KIAA0513O60268 411 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 MTX2O75431 263 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 ANXA9O76027 345 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 TSHBP01222 138 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 HMBSP08397 361 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 PDHBP11177 359 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 ATP6V1C1P21283 382 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 FCARP24071 287 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 PPP2R1AP30153 589 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 OR1D2P34982 312 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 FEN1P39748 380 aaKnown RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 MATKP42679 507 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 SLC6A8P48029 635 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 LIMK2P53671 638 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 PHEXP78562 749 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 OR1C1Q15619 314 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 ZKSCAN8Q15776 578 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 NADK2Q4G0N4 442 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 RFTN2Q52LD8 501 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 LIPJQ5W064 366 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 CAPN13Q6MZZ7 669 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 KIF6Q6ZMV9 814 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 Q6ZRG5 221 aa3.69□□□□□ -1.82
SNHG1-217ENST00000541578 TRMT1LQ7Z2T5 733 aaKnown RBP3.69□□□□□ -1.82
SNHG1-217ENST00000541578 P4HA3Q7Z4N8 544 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms