RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 BORCS5Q969J3 196 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 GTPBP3Q969Y2 492 aaKnown RBP12.76□□□□□ -0.37
SMG6-203ENST00000536871 YIPF6Q96EC8 236 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 KLHDC7BQ96G42 594 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 ITPAQ9BY32 194 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 MTHFD2LQ9H903 347 aaPredicted RBP12.76□□□□□ -0.37
SMG6-203ENST00000536871 UCK1Q9HA47 277 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 ANKHQ9HCJ1 492 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 HRASLS2Q9NWW9 162 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 KLHL20Q9Y2M5 609 aa12.76□□□□□ -0.37
SMG6-203ENST00000536871 TRBV4-1A0A0J9YWV2 114 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 PRAMEF27A3QJZ7 478 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 OR5K3A6NET4 321 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 MBTPS2O43462 519 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 CTSVO60911 334 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 BCAS1O75363 584 aaPredicted RBP12.75□□□□□ -0.37
SMG6-203ENST00000536871 CHRM4P08173 479 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 ZNF12P17014 697 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 PSMB9P28065 219 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 HOXD12P35452 270 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 EIF2B5Q13144 721 aaKnown RBP12.75□□□□□ -0.37
SMG6-203ENST00000536871 TDGQ13569 410 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 CYP27C1Q4G0S4 372 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 EIPR1Q53HC9 387 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 ZNF311Q5JNZ3 666 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 MEDAGQ5VYS4 303 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 SLC22A18ASQ8N1D0 253 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 STX19Q8N4C7 294 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 VANGL1Q8TAA9 524 aaPredicted RBP12.75□□□□□ -0.37
SMG6-203ENST00000536871 SLC38A4Q969I6 547 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 PRRG3Q9BZD7 231 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 NAA50Q9GZZ1 169 aaKnown RBP12.75□□□□□ -0.37
SMG6-203ENST00000536871 CHRDQ9H2X0 955 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 CD93Q9NPY3 652 aa12.75□□□□□ -0.37
SMG6-203ENST00000536871 HEATR5BQ9P2D3 2071 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 TRBV23OR9-2A0A075B6M9 112 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 HTR3EA5X5Y0 456 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 H0YGG7 62 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 CNOT3O75175 753 aaKnown RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 NME6O75414 186 aaPredicted RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 PRKRAO75569 313 aaKnown RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 CLPXO76031 633 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 FADS2O95864 444 aaKnown RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 CPMP14384 443 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 ARF3P61204 181 aaPredicted RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 OCA2Q04671 838 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 PIGFQ07326 219 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMG6-203ENST00000536871 ST3GAL3Q11203 375 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 FZD2Q14332 565 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 CTF1Q16619 201 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 DEFB134Q4QY38 66 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 TMEM201Q5SNT2 666 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 MFSD12Q6NUT3 480 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 CASP12Q6UXS9 341 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SLC16A12Q6ZSM3 486 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 PTCHD4Q6ZW05 846 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SDR16C5Q8N3Y7 309 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 OR8J1Q8NGP2 316 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 ADAMTS18Q8TE60 1221 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SLC37A2Q8TED4 501 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 GIMAP5Q96F15 307 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 ARHGDIGQ99819 225 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SEMA6CQ9H3T2 930 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 KRCC1Q9NPI7 259 aaPredicted RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 ZNF226Q9NYT6 803 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 CYP8B1Q9UNU6 501 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SATB2Q9UPW6 733 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 TRANK1O15050 2925 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SHISA7A6NL88 538 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SNTNA6NMZ2 147 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 TLR4O00206 839 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 STATHP02808 62 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 ATP1B1P05026 303 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 THBS1P07996 1170 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 C8orf89P0DMQ9 161 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 ALDH4A1P30038 563 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 MASP1P48740 699 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 TUBA1BP68363 451 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 HHEXQ03014 270 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 FUT5Q11128 374 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 LARS2Q15031 903 aaKnown RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 ELOCQ15369 112 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SMN1Q16637 294 aaKnown RBP12.74□□□□□ -0.37
SMG6-203ENST00000536871 DGUOKQ16854 277 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 ARHGAP11BQ3KRB8 267 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 SLC25A30Q5SVS4 291 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 LAIR1Q6GTX8 287 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 C1orf94Q6P1W5 598 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 PGBD2Q6P3X8 592 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 CCDC81Q6ZN84 652 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 TUBA1AQ71U36 451 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 PEX5LQ8IYB4 626 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 ZNF675Q8TD23 568 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 KLHL6Q8WZ60 621 aa12.74□□□□□ -0.37
SMG6-203ENST00000536871 GGHQ92820 318 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms