RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SNRPD1P62314 119 aaKnown RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 MRPS6P82932 125 aaKnown RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF85Q03923 595 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 SNTB2Q13425 540 aaKnown RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 CD226Q15762 336 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 DCAF4L1Q3SXM0 396 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 POM121L1PQ3SYA9 428 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 NADK2Q4G0N4 442 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 UNC50Q53HI1 259 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 ARHGAP11AQ6P4F7 1023 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZER1Q7Z7L7 766 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 KCNMB4Q86W47 210 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 UNC5CLQ8IV45 518 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 MISPQ8IVT2 679 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 RAB42Q8N4Z0 105 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 CNBD1Q8NA66 436 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR52M1Q8NGK5 317 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 SPATA3Q8NHX4 192 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 FCGR1BQ92637 280 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 RBM4Q9BWF3 364 aaKnown RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 GPN2Q9H9Y4 310 aaPredicted RBP2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 MEAF6Q9HAF1 191 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 PALMDQ9NP74 551 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 THYN1Q9P016 225 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 BCAP29Q9UHQ4 241 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 SPATA2Q9UM82 520 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 PROCRQ9UNN8 238 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 FHAD1B1AJZ9 1412 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 CASKIN1Q8WXD9 1431 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 FANCD2Q9BXW9 1451 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 MAGI3Q5TCQ9 1506 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 IQGAP2Q13576 1575 aa2.83□□□□□ -1.96
HMGN1P28-201ENST00000521340 MYO5CQ9NQX4 1742 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 IGHV4-30-2A0A087WSY4 118 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 A0A1W2PPR1 153 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 PRR23D1E9PI22 279 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 H3BMH7 237 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 SOCS3O14543 225 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 TRAFD1O14545 582 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ALOX15BO15296 676 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 HOXB7P09629 217 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 PRR23D2P0DMB1 279 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 PAICSP22234 425 aaKnown RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 PPP2R1AP30153 589 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 AXLP30530 894 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 OTX2P32243 289 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 SAA4P35542 130 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 CYLC1P35663 651 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 POU3F4P49335 361 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 PPIAP62937 165 aaKnown RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 CHIT1Q13231 466 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NME3Q13232 169 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 EXOSC2Q13868 293 aaKnown RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 KIAA0141Q14154 515 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF146Q15072 292 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 TRIP10Q15642 601 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 PARP6Q2NL67 630 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 HSP90AA5PQ58FG0 334 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 SPATA46Q5T0L3 261 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 HACD2Q6Y1H2 254 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 TMEM184AQ6ZMB5 413 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ADAMTSL5Q6ZMM2 481 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ASRGL1Q7L266 308 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 CHMP1BQ7LBR1 199 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NET1Q7Z628 596 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 RPAINQ86UA6 219 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 RANBP3LQ86VV4 465 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NR2C2APQ86WQ0 139 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZDHHC21Q8IVQ6 265 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF614Q8N883 585 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 MLKLQ8NB16 471 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 AQP11Q8NBQ7 271 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NUP37Q8NFH4 326 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR4F17Q8NGA8 305 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 FLVCR1-AS1Q8TAF5 88 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 PRICKLE1Q96MT3 831 aaPredicted RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 VSTM2LQ96N03 204 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 OR4F4Q96R69 305 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZSCAN5AQ9BUG6 496 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ZNF416Q9BWM5 594 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NT5DC2Q9H857 520 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 RMND5AQ9H871 391 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NMUR1Q9HB89 426 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 TRPV5Q9NQA5 729 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NDE1Q9NXR1 346 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 GTSE1Q9NYZ3 720 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 NLGN3Q9NZ94 848 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 BAIAP2L1Q9UHR4 511 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 XPO7Q9UIA9 1087 aaKnown RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 EMCNQ9ULC0 261 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 MRPS28Q9Y2Q9 187 aaKnown RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 SF3B1O75533 1304 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 ATP10DQ9P241 1426 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 CCDC18Q5T9S5 1454 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 URB2Q14146 1524 aaKnown RBP2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 KDM6BO15054 1643 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 KIAA0556O60303 1618 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 KIF14Q15058 1648 aa2.82□□□□□ -1.96
HMGN1P28-201ENST00000521340 VIRMAQ69YN4 1812 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms