RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-204	ENST00000521331	PLCXD2	Q0VAA5	305 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	MAP4K2	Q12851	820 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	GAB1	Q13480	694 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	CCNYL2	Q5T2Q4	361 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	MROH9	Q5TGP6	573 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	FRG2	Q64ET8	278 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	ADGRE4P	Q86SQ3	457 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	CCDC25	Q86WR0	208 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	OR14L1P	Q8NHC6	308 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	WNT2B	Q93097	391 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	HGD	Q93099	445 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	ATP6V1E2	Q96A05	226 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	OMA1	Q96E52	524 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	LCOR	Q96JN0	433 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	FRG2B	Q96QU4	278 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	TUBA1C	Q9BQE3	449 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	OR2B2	Q9GZK3	357 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	NOL11	Q9H8H0	719 aa	Known RBP	13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	GALNT8	Q9NY28	637 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	KLRF1	Q9NZS2	232 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	CPSF2	Q9P2I0	782 aa	Known RBP	13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	EXO1	Q9UQ84	846 aa	Known RBP	13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	DTX4	Q9Y2E6	619 aa		13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	UTP11	Q9Y3A2	253 aa	Known RBP	13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	NSD1	Q96L73	2696 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKDC-204	ENST00000521331	MPDZ	O75970	2070 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	C1orf226	A1L170	272 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	FAM171A2	A8MVW0	826 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	CASK	O14936	926 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	SIX3	O95343	332 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	CHM	P24386	653 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	SOX18	P35713	384 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	SLCO1A2	P46721	670 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	CCNG1	P51959	295 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	MAPK12	P53778	367 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	DIO3	P55073	304 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	NKX6-1	P78426	367 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	FOXF2	Q12947	444 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	IFT88	Q13099	833 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	NNAT	Q16517	81 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	PRICKLE4	Q2TBC4	344 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	TTC19	Q6DKK2	380 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	SLC48A1	Q6P1K1	146 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	LUZP2	Q86TE4	346 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	SPATA4	Q8NEY3	305 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	TRPC4AP	Q8TEL6	797 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	CDK15	Q96Q40	435 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	NODAL	Q96S42	347 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	NTMT1	Q9BV86	223 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	ITPA	Q9BY32	194 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	MRPL1	Q9BYD6	325 aa	Known RBP	13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	BRINP2	Q9C0B6	783 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	GALNT9	Q9HCQ5	603 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	SERHL	Q9NQF3	203 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	NDRG3	Q9UGV2	375 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	BCAP29	Q9UHQ4	241 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	MAPRE3	Q9UPY8	281 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	EIF3L	Q9Y262	564 aa	Known RBP	13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331	PCDHA9	Q9Y5H5	950 aa		13.54	□□□□□ -0.24
PRKDC-204	ENST00000521331		A0A096LPK6	155 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	PRAMEF25	A6NGN4	478 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	OR7A17	O14581	309 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	ARHGEF9	O43307	516 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	CSNK2A2	P19784	350 aa	Predicted RBP	13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	PTGDS	P41222	190 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	SRY	Q05066	204 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	MGAT2	Q10469	447 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	POU4F3	Q15319	338 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	AAGAB	Q6PD74	315 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	CLEC9A	Q6UXN8	241 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	IFNE	Q86WN2	208 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	KRTAP1-3	Q8IUG1	177 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	TRIM42	Q8IWZ5	723 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	METTL4	Q8N3J2	472 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	OR52B6	Q8NGF0	335 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	FBXO25	Q8TCJ0	367 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	SLC44A1	Q8WWI5	657 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	INTS12	Q96CB8	462 aa	Known RBP	13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	GPR78	Q96P69	363 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	SMR3A	Q99954	134 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	RAB17	Q9H0T7	212 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	TAS2R10	Q9NYW0	307 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	MAT2B	Q9NZL9	334 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	PRODH2	Q9UF12	536 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	ZNF639	Q9UID6	485 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	PACSIN3	Q9UKS6	424 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	CES1P1	Q9UKY3	287 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	PSME2	Q9UL46	239 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	TMCO1	Q9UM00	188 aa		13.53	□□□□□ -0.24
PRKDC-204	ENST00000521331	HMX2	A2RU54	273 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331		A8MXE2	369 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	T	O15178	435 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	UGT2B11	O75310	529 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	ERAL1	O75616	437 aa	Known RBP	13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	DRD5	P21918	477 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	CNTF	P26441	200 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	TYK2	P29597	1187 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	SRD5A2	P31213	254 aa		13.52	□□□□□ -0.25
PRKDC-204	ENST00000521331	FEN1	P39748	380 aa	Known RBP	13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms