RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SDCCAG3Q96C92 435 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 HSPBAP1Q96EW2 488 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 RILPQ96NA2 401 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 BBS4Q96RK4 519 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 SECISBP2Q96T21 854 aaKnown RBP30.48■■■□□ 2.47
CBX4-203ENST00000494546 TRMOQ9BU70 441 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 PNPLA3Q9NST1 481 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 B4GALT7Q9UBV7 327 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 ZNF407Q9C0G0 2248 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 TRGV5A0A0B4J1U4 118 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 AQP7O14520 342 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 BCKDKO14874 412 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 AZIN1O14977 448 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 SUSD5O60279 629 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 PPM1BO75688 479 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 CLDN14O95500 239 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 ERCC6LQ2NKX8 1250 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 NOXRED1Q6NXP6 359 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 TICAM1Q8IUC6 712 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 MARVELD2Q8N4S9 558 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 FAM76AQ8TAV0 307 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 MECRQ9BV79 373 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 CHST11Q9NPF2 352 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 MIEF1Q9NQG6 463 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 SENP1Q9P0U3 644 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 ACAD8Q9UKU7 415 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 PCNX1Q96RV3 2341 aa30.47■■■□□ 2.47
CBX4-203ENST00000494546 SLC28A1O00337 649 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 TRIM3O75382 744 aaPredicted RBP30.46■■■□□ 2.47
CBX4-203ENST00000494546 SEC22BO75396 215 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 ABCB1P08183 1280 aaPredicted RBP30.46■■■□□ 2.47
CBX4-203ENST00000494546 MPIP34949 423 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 DCAF7P61962 342 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 PLCXD2Q0VAA5 305 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 TMEM211Q6ICI0 200 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 FAM71E1Q6IPT2 247 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 ZNF585AQ6P3V2 769 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 FAM9CQ8IZT9 166 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 RPRMLQ8N4K4 120 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 TCP10LQ8TDR4 215 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 OMA1Q96E52 524 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 ANGPTL4Q9BY76 406 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 MYNNQ9NPC7 610 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 COQ3Q9NZJ6 369 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 CCL27Q9Y4X3 112 aa30.46■■■□□ 2.47
CBX4-203ENST00000494546 ACOX3O15254 700 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 HCN1O60741 890 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 NME6O75414 186 aaPredicted RBP30.45■■■□□ 2.47
CBX4-203ENST00000494546 BCAS2O75934 225 aaPredicted RBP30.45■■■□□ 2.47
CBX4-203ENST00000494546 SNX4O95219 450 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 NAGAP17050 411 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 GDF1P27539 372 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 CASP3P42574 277 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 PPICP45877 212 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 MASP1P48740 699 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 CEBPEQ15744 281 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 PRSS53Q2L4Q9 553 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 PACS2Q86VP3 889 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 SARAFQ96BY9 339 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 ERP27Q96DN0 273 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 PARD6BQ9BYG5 372 aa30.45■■■□□ 2.47
CBX4-203ENST00000494546 RGS14O43566 566 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 CHEK2O96017 543 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 CHRNGP07510 517 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 DRD5P21918 477 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 DESI1Q6ICB0 168 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 PUM2Q8TB72 1066 aaKnown RBP eCLIP30.44■■■□□ 2.46
CBX4-203ENST00000494546 CA5BP1Q8WTZ4 195 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 SLC6A15Q9H2J7 730 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 METTL7AQ9H8H3 244 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 LRTM1Q9HBL6 345 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 QPCTLQ9NXS2 382 aa30.44■■■□□ 2.46
CBX4-203ENST00000494546 FRG2CA6NGY1 282 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 FIGNL2A6NMB9 653 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 TRPC1P48995 793 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 NCBP2P52298 156 aaKnown RBP eCLIP30.43■■■□□ 2.463e-8■□□□□ 10.1
CBX4-203ENST00000494546 KANK2Q63ZY3 851 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 NUP54Q7Z3B4 507 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 LIX1Q8N485 282 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 OR7G2Q8NG99 324 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 C1orf109Q9NX04 203 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 SPRR3Q9UBC9 169 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 GPR55Q9Y2T6 319 aaPredicted RBP30.43■■■□□ 2.46
CBX4-203ENST00000494546 WBP11Q9Y2W2 641 aaKnown RBP30.43■■■□□ 2.46
CBX4-203ENST00000494546 DNAJC13O75165 2243 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 NINQ8N4C6 2090 aa30.43■■■□□ 2.46
CBX4-203ENST00000494546 MYO1GB0I1T2 1018 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 NPHS1O60500 1241 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 JUNP05412 331 aaKnown RBP30.42■■■□□ 2.46
CBX4-203ENST00000494546 SNRPB2P08579 225 aaKnown RBP30.42■■■□□ 2.46
CBX4-203ENST00000494546 CREB1P16220 341 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 ENDOUP21128 410 aaKnown RBP30.42■■■□□ 2.46
CBX4-203ENST00000494546 PRPH2P23942 346 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 ACVR2AP27037 513 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 KIAA0040Q15053 153 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 WLSQ5T9L3 541 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 MREGQ8N565 214 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 OR2T11Q8NH01 316 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 RND1Q92730 232 aa30.42■■■□□ 2.46
CBX4-203ENST00000494546 HGDQ93099 445 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms