RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ATG13O75143 517 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SC5DO75845 299 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 IL3P08700 152 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ACP2P11117 423 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 LAMP2P13473 410 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 PYCR1P32322 319 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 CBX5P45973 191 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 ST8SIA6P61647 398 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 PIN1Q13526 163 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 P2RY14Q15391 338 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SEC23BQ15437 767 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM69Q5SWH9 247 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 BCDIN3DQ7Z5W3 292 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SVBPQ8N300 66 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 MDGA1Q8NFP4 955 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 YIPF4Q9BSR8 244 aa10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 SORBS1Q9BX66 1292 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 NXF2Q9GZY0 626 aaKnown RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 PRMT8Q9NR22 394 aaPredicted RBP10.73□□□□□ -0.69
CRNKL1-204ENST00000490910 TRDV1A0A1B0GX56 115 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 URODP06132 367 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 EPHX1P07099 455 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 S100A2P29034 98 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 S100A11P31949 105 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 MAP2K6P52564 334 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 ADAM8P78325 824 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 TGM3Q08188 693 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 PAQR6Q6TCH4 344 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 METTL3Q86U44 580 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 BEST3Q8N1M1 668 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 BOLLQ8N9W6 283 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SCARB1Q8WTV0 552 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 UCN3Q969E3 161 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 LRRC46Q96FV0 321 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM19Q96HH6 336 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 HSPA12BQ96MM6 686 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 PRDM5Q9NQX1 630 aaPredicted RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 ASIC5Q9NY37 505 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 CALML5Q9NZT1 146 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 KLHL9Q9P2J3 617 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 KIF25Q9UIL4 384 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 YARS2Q9Y2Z4 477 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 V9GYH0 126 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 A0A1W2PRQ8 180 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 GABRR3A8MPY1 467 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 RBBP9O75884 186 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 NPR2P20594 1047 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 MAOBP27338 520 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SOX9P48436 509 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SNRPGP62308 76 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SMAD3P84022 425 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 FGL1Q08830 312 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 MLIPQ5VWP3 458 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 TMEM81Q6P7N7 255 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SBSNQ6UWP8 590 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 ZNF527Q8NB42 609 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 FBXO15Q8NCQ5 510 aaPredicted RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 CLRN3Q8NCR9 226 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 OR52I1Q8NGK6 324 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 APH1BQ8WW43 257 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 S100PBPQ96BU1 408 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 FUBP3Q96I24 572 aaKnown RBP eCLIP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 AIF1LQ9BQI0 150 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 ACTL8Q9H568 366 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 GPN3Q9UHW5 284 aaPredicted RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 GJD2Q9UKL4 321 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 ASF1AQ9Y294 204 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 TRBV4-1A0A0J9YWV2 114 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 FAM227AF5H4B4 570 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 F5H5P2 479 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 BET1O15155 118 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 GPR39O43194 453 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 FZD7O75084 574 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 B3GALT4O96024 378 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 EDNRAP25101 427 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 VIPR1P32241 457 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 HMGCLP35914 325 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 CCR6P51684 374 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 ELAVL2Q12926 359 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SP140Q13342 867 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SF1Q15637 639 aaKnown RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 HBMQ6B0K9 141 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 CALHM3Q86XJ0 350 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 SLC44A3Q8N4M1 653 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 C2orf73Q8N5S3 287 aaPredicted RBP10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 MS4A15Q8N5U1 240 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 OR4M1Q8NGD0 313 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 ARMC5Q96C12 935 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 CXorf40BQ96DE9 158 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 MARVELD1Q9BSK0 173 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 DNTTIP1Q9H147 329 aa10.72□□□□□ -0.69
CRNKL1-204ENST00000490910 MTX2O75431 263 aa10.71□□□□□ -0.69
CRNKL1-204ENST00000490910 SIX6O95475 246 aa10.71□□□□□ -0.69
CRNKL1-204ENST00000490910 GABRB1P18505 474 aa10.71□□□□□ -0.69
CRNKL1-204ENST00000490910 CCL23P55773 120 aa10.71□□□□□ -0.69
CRNKL1-204ENST00000490910 EIF5AP63241 154 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms