RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 ATG14Q6ZNE5 492 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TMPRSS7Q7RTY8 843 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TRIM46Q7Z4K8 759 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 RPS19BP1Q86WX3 136 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PGAM4Q8N0Y7 254 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 FAM181AQ8N9Y4 354 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SLC16A11Q8NCK7 471 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SLC22A8Q8TCC7 542 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PHF10Q8WUB8 498 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CCNL2Q96S94 520 aaPredicted RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CCDC90BQ9GZT6 254 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ING2Q9H160 280 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 OR10A5Q9H207 317 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CXorf36Q9H7Y0 433 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 NECTIN3Q9NQS3 549 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SDR39U1Q9NRG7 319 aaPredicted RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 P4HTMQ9NXG6 502 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PIEZO2Q9H5I5 2752 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CFAP73A6NFT4 308 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CPSF4LA6NMK7 179 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SORBS2O94875 1100 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TRPC1P48995 793 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 NUBP1P53384 320 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ATP1A4Q13733 1029 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 NCF4Q15080 339 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 UGT3A2Q3SY77 523 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 B3GNTL1Q67FW5 361 aaPredicted RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CPEB2Q7Z5Q1 589 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 MCEMP1Q8IX19 187 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ST13P4Q8IZP2 240 aaPredicted RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ADAMTS18Q8TE60 1221 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 FGF11Q92914 225 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TMBIM1Q969X1 311 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CNRIP1Q96F85 164 aaPredicted RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TMEM19Q96HH6 336 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 FER1L6-AS2Q96M78 137 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ITPAQ9BY32 194 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 BHLHE41Q9C0J9 482 aaPredicted RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 VCX3BQ9H321 246 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 REEP1Q9H902 201 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TMEM27Q9HBJ8 222 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PPP4R1LQ9P1A2 415 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 RPS6KA6Q9UK32 745 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 DKKL1Q9UK85 242 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 KLK13Q9UKR3 277 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PPT2Q9UMR5 302 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SAMHD1Q9Y3Z3 626 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 OBSL1O75147 1896 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 MED12Q93074 2177 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 DHRS12A0PJE2 317 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TTLL8A6PVC2 850 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 H3BML4 177 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PROM1O43490 865 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 LRP3O75074 770 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 KRT33AO76009 404 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PRKD3O94806 890 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CST1P01037 141 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 HIST1H2ABP04908 130 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 GKN3PP0CG01 181 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CD247P20963 164 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SFTPDP35247 375 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CDH12P55289 794 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PER3P56645 1201 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 NUP107P57740 925 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SNCBQ16143 134 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 NRF1Q16656 503 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 FAM71E1Q6IPT2 247 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 RHBDD2Q6NTF9 364 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 TMEM214Q6NUQ4 689 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 HIST3H2AQ7L7L0 130 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PDSS2Q86YH6 399 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SLC38A9Q8NBW4 561 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 OR6Y1Q8NGX8 325 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 HIST1H2ACQ93077 130 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ANKRD27Q96NW4 1050 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PELOQ9BRX2 385 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 UGT2B28Q9BY64 529 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CADM1Q9BY67 442 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 C14orf105Q9NVL8 296 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SUCOQ9UBS9 1254 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 NXT1Q9UKK6 140 aaKnown RBP5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 LYVE1Q9Y5Y7 322 aa5□□□□□ -1.61
RAB3GAP1-204ENST00000487003 POLEQ07864 2286 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 DNAJC13O75165 2243 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CACNA1CQ13936 2221 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 KRT36O76013 467 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SOX30O94993 753 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 LDLRP01130 860 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 IFNW1P05000 195 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 GP1BAP07359 652 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CELA2AP08217 269 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ZNF883P0CG24 379 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 CD1EP15812 388 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 ACP1P24666 158 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 FASP25445 335 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 PSMA3P25788 255 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 NBL1P41271 181 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 HSD17B7P56937 341 aa4.99□□□□□ -1.61
RAB3GAP1-204ENST00000487003 SELPLGQ14242 412 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms