RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 UPF3AQ9H1J1 476 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 OPN3Q9H1Y3 402 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 VCX2Q9H322 139 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 MINDY3Q9H8M7 445 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PELI2Q9HAT8 420 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 FOLH1BQ9HBA9 442 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 NOD2Q9HC29 1040 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PNPLA3Q9NST1 481 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 GID8Q9NWU2 228 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 CMTM6Q9NX76 183 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 P4HTMQ9NXG6 502 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 NKIRAS1Q9NYS0 192 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 MRPL15Q9P015 296 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 NYAP2Q9P242 653 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PEMTQ9UBM1 199 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TRPC4Q9UBN4 977 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SLC24A2Q9UI40 661 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ENPP5Q9UJA9 477 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 LEF1Q9UJU2 399 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 NUP50Q9UKX7 468 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 INTS6Q9UL03 887 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 STAP1Q9ULZ2 295 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PLEKHA6Q9Y2H5 1048 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 AAR2Q9Y312 384 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 IFT52Q9Y366 437 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 LSM4Q9Y4Z0 139 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 CSNK1G3Q9Y6M4 447 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 U3KQV3 271 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PBRM1Q86U86 1689 aa2.28□□□□□ -2.05
XRN1-211ENST00000477237 ERCC6Q03468 1493 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 FGD5Q6ZNL6 1462 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NLRP1Q9C000 1473 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PTCH1Q13635 1447 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 KIAA0232Q92628 1395 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ANKRD30BQ9BXX2 1392 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 UTYO14607 1347 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ZNF541Q9H0D2 1346 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 A0A1W2PRG0 241 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 FAM149AA5PLN7 773 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 GLOD5A6NK44 160 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 LRRC53A6NM62 1247 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ZNF729A6NN14 1252 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 HAS3O00219 553 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SCAMP2O15127 329 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 CLOCKO15516 846 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 COCHO43405 550 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 BUD23O43709 281 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 SCO2O43819 266 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TBX19O60806 448 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 B4GALT2O60909 372 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SCN2BO60939 215 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 MITFO75030 526 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 CDH16O75309 829 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 OR2C1O95371 312 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 MT-ATP6P00846 226 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SERPINA3P01011 423 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 APOC1P02654 83 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 IFNA6P05013 189 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SERPINA5P05154 406 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 KRTAP1-4P0C5Y4 121 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 OR2T7P0C7T2 308 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 FAM106CPP0CH98 169 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CEACAM1P13688 526 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TNNI1P19237 187 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PTNP21246 168 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ACP1P24666 158 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 G0S2P27469 103 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 OTX2P32243 289 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CDKN2CP42773 168 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ALDH3B2P48448 385 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 GSSP48637 474 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CCR4P51679 360 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CCNG1P51959 295 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 HNRNPFP52597 415 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 AP2S1P53680 142 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 IST1P53990 364 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 EMP2P54851 167 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 NUP107P57740 925 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ACTR2P61160 394 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 AP1S1P61966 158 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 CSNK1G2P78368 415 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SORDQ00796 357 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SCN1BQ07699 218 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TEFQ10587 303 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ILF2Q12905 390 aaKnown RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 SPP2Q13103 211 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PDZK1IP1Q13113 114 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 OLIG2Q13516 323 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 HEPACAMQ14CZ8 416 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PON3Q15166 354 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 ANGPT1Q15389 498 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 STXBP2Q15833 593 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 USF2Q15853 346 aaPredicted RBP2.27□□□□□ -2.05
XRN1-211ENST00000477237 CAMK4Q16566 473 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 PHKG1Q16816 387 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 HYAL4Q2M3T9 481 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TCTN1Q2MV58 587 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 SNAI3Q3KNW1 292 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 EPC2Q52LR7 807 aa2.27□□□□□ -2.05
XRN1-211ENST00000477237 TEX44Q53QW1 395 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms