RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TCRBP04435 133 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OSMP13725 252 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ZNF44P15621 663 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ITGALP20701 1170 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ELAVL4P26378 380 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 HSD3B2P26439 372 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 HOXD9P28356 352 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 CSNK1EP49674 416 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 RGS4P49798 205 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TAF6P49848 677 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 CRISP1P54107 249 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PRMT2P55345 433 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 DGCR6Q14129 220 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 GGTLC2Q14390 218 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PTGR1Q14914 329 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 RGNQ15493 299 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ZNF750Q32MQ0 723 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 HBMQ6B0K9 141 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 RAET1GQ6H3X3 334 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 METTL7BQ6UX53 244 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 LINGO4Q6UY18 593 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TMPRSS11FQ6ZWK6 438 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 LHFPL3Q86UP9 236 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SYTL1Q8IYJ3 562 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PRR18Q8N4B5 295 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PPHLN1Q8NEY8 458 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 SMIM4Q8WVI0 70 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SLC25A28Q96A46 364 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SGK3Q96BR1 496 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SLC25A38Q96DW6 304 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 PPP1R16BQ96T49 567 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 C12orf57Q99622 126 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 SIK2Q9H0K1 926 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 ABCG5Q9H222 651 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OR51J1Q9H342 316 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 OSGEPL1Q9H4B0 414 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 KRT84Q9NSB2 600 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 FAM120CQ9NX05 1096 aaKnown RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 ZNF70Q9UC06 446 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 GPN3Q9UHW5 284 aaPredicted RBP3.86□□□□□ -1.79
USP16-205ENST00000474835 TIMM10BQ9Y5J6 103 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 RAI2Q9Y5P3 530 aa3.86□□□□□ -1.79
USP16-205ENST00000474835 TRAPPC13A5PLN9 417 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 RFPL4AA6NLU0 287 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 RFPL4AL1F8VTS6 287 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SLC28A1O00337 649 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PRAF2O60831 178 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TSPAN9O75954 239 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 KAT7O95251 611 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 IL18BPO95998 194 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 THY1P04216 161 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ARAFP10398 606 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 IL9P15248 144 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 RPS2P15880 293 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 IGFBP6P24592 240 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 TACR1P25103 407 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 DPP4P27487 766 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SOX6P35712 828 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TSPAN7P41732 249 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PTH2RP49190 550 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 RPS7P62081 194 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 IL5RAQ01344 420 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ZNF124Q15973 351 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 IGSF11Q5DX21 431 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PAQR3Q6TCH7 311 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 C5orf24Q7Z6I8 188 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ZBTB2Q8N680 514 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 FAM46DQ8NEK8 389 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SFT2D1Q8WV19 159 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 NDRG1Q92597 394 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 EDAQ92838 391 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TBATAQ96M53 351 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SFXN2Q96NB2 322 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 C1QTNF6Q9BXI9 259 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TCF7L1Q9HCS4 588 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PCDHB16Q9NRJ7 776 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TAS2R5Q9NYW4 299 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PDP1Q9P0J1 537 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 NTMQ9P121 344 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 KLHL9Q9P2J3 617 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 LHX6Q9UPM6 363 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 KLHL20Q9Y2M5 609 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 HSPB11Q9Y547 144 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 THADAQ6YHU6 1953 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3DA0A087WVF3 549 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3IA0A087WXS9 549 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3EA0A087X179 549 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3KA0A087X1G2 549 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 OR6C68A6NDL8 312 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3FA6NER0 549 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3LB9A6J9 549 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 NPIPB9F8W1W9 429 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 M0QZQ0 153 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ARVCFO00192 962 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 WWP2O00308 870 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 OGG1O15527 345 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ORC5O43913 435 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 HPGDSO60760 199 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PSIP1O75475 530 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 APOA1P02647 267 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms