RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SHCBP1LQ9BZQ2 653 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZNF703Q9H7S9 590 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 PRM3Q9NNZ6 103 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 MS4A12Q9NXJ0 267 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 TUBA8Q9NY65 449 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SPRR3Q9UBC9 169 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 VPS29Q9UBQ0 182 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 ST6GALNAC2Q9UJ37 374 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 MID2Q9UJV3 735 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCL27Q9Y4X3 112 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 PTGDR2Q9Y5Y4 395 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 SPACA6W5XKT8 324 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 MXRA5Q9NR99 2828 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 CSPG4Q6UVK1 2322 aa7.29□□□□□ -1.24
CDC42BPA-210ENST00000462553 HEATR5AQ86XA9 2040 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 STAB1Q9NY15 2570 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 ROS1P08922 2347 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 LRRC3CA6NJW4 275 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 C17orf105B2RV13 164 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 KDM4EB2RXH2 506 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 PCDH7O60245 1069 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 SUSD5O60279 629 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 TRIM13O60858 407 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 GPR75O95800 540 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 IFNA16P05015 189 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 TUBBP07437 444 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 CT62P0C5K7 136 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 ALOX15P16050 662 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 KLK2P20151 261 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 CNR1P21554 472 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 SERPINB3P29508 390 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 TIA1P31483 386 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 MAPK12P53778 367 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 NAA20P61599 178 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 RNF4P78317 190 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 FOXD4Q12950 439 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 CEBPEQ15744 281 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLC25A35Q3KQZ1 300 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 BEND6Q5SZJ8 279 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 C1orf185Q5T7R7 199 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 CLEC6AQ6EIG7 209 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 LYPD8Q6UX82 237 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 HSDL2Q6YN16 418 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 RTL4Q6ZR62 310 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZCCHC23Q6ZST2 131 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 PAGE2Q7Z2X7 111 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 TRIM46Q7Z4K8 759 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 EXOC3L1Q86VI1 746 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 C9orf40Q8IXQ3 194 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 ST13P4Q8IZP2 240 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 CLYBLQ8N0X4 340 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 GBP7Q8N8V2 638 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 NAXEQ8NCW5 288 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 MORN4Q8NDC4 146 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR10Q1Q8NGQ4 319 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR8K3Q8NH51 312 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 DAZLQ92904 295 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 PPWD1Q96BP3 646 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 ZBTB9Q96C00 473 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 PKNOX2Q96KN3 472 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 DGAT2Q96PD7 388 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 SH3GL2Q99962 352 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 GPATCH1Q9BRR8 931 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR8D2Q9GZM6 311 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 TUBB1Q9H4B7 451 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 GSX1Q9H4S2 264 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 IL1RL2Q9HB29 575 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 PROK2Q9HC23 129 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 SIRT5Q9NXA8 310 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 DNAJB12Q9NXW2 375 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 HEY2Q9UBP5 337 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 MCM8Q9UJA3 840 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 RPH3AQ9Y2J0 694 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 PCDHA9Q9Y5H5 950 aa7.28□□□□□ -1.24
CDC42BPA-210ENST00000462553 FBN1P35555 2871 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RAI1Q7Z5J4 1906 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ATP6AP2A0A1C7CYW4 349 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 CCDC151A5D8V7 595 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 TMEM233B4DJY2 109 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 NPIPB8E9PQR5 432 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 H3BQF6 201 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 AZIN1O14977 448 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RGS16O15492 202 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 NPHS1O60500 1241 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 WDR1O75083 606 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ULK1O75385 1050 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ATP6AP2O75787 350 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 BPGMP07738 259 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 IL3P08700 152 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 RFPL3SP0C7P2 107 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 DHRS4L1P0CG22 281 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 UROSP10746 265 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 PRPH2P23942 346 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 TLX1P31314 330 aaPredicted RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 GALNSP34059 522 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 PIGAP37287 484 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 TRA2BP62995 288 aaKnown RBP7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 ERVK-8P63133 956 aa7.27□□□□□ -1.25
CDC42BPA-210ENST00000462553 PLIN5Q00G26 463 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms