RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 SLC35C1Q96A29 364 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 RMDN1Q96DB5 314 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 SGF29Q96ES7 293 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 SDF4Q9BRK5 362 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 APOL6Q9BWW8 343 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 ELL3Q9HB65 397 aaPredicted RBP1.24□□□□□ -2.21
LRCH3-209ENST00000452660 PATZ1Q9HBE1 687 aaKnown RBP1.24□□□□□ -2.21
LRCH3-209ENST00000452660 KLRF1Q9NZS2 232 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 DPM3Q9P2X0 92 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 NCKAP1Q9Y2A7 1128 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 ANKRD17O75179 2603 aaKnown RBP1.24□□□□□ -2.21
LRCH3-209ENST00000452660 ABCA12Q86UK0 2595 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 WDFY3Q8IZQ1 3526 aa1.24□□□□□ -2.21
LRCH3-209ENST00000452660 RIF1Q5UIP0 2472 aaKnown RBP1.24□□□□□ -2.21
LRCH3-209ENST00000452660 ITPR3Q14573 2671 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 IGLV8-61A0A075B6I0 122 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 CCDC189A1A4V9 331 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 SYNDIG1LA6NDD5 238 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 A8MX80 341 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 FLRT2O43155 660 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 NUDT21O43809 227 aaKnown RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 CLN5O75503 358 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 IGHG3P01860 377 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 ACKR3P25106 362 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 XCR1P46094 333 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 PPOXP50336 477 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 ZNF33BQ06732 778 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 TNK1Q13470 666 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 CEACAM7Q14002 265 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 TAZQ16635 292 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 QRICH1Q2TAL8 776 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 IQCCQ4KMZ1 466 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 GORABQ5T7V8 394 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 WDR25Q64LD2 544 aaPredicted RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 ZNF770Q6IQ21 691 aaPredicted RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 TFAP2EQ6VUC0 442 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 PRPF39Q86UA1 669 aaKnown RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 Q8N9G6 341 aaPredicted RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 RNF149Q8NC42 400 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 RAD54LQ92698 747 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 SKA1Q96BD8 255 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 SLC35E1Q96K37 410 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 PRAM1Q96QH2 718 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 C19orf43Q9BQ61 176 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 GTPBP2Q9BX10 602 aaKnown RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 UBA5Q9GZZ9 404 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 NTN4Q9HB63 628 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 MIEF1Q9NQG6 463 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 HPS4Q9NQG7 708 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 BLOC1S4Q9NUP1 217 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 RAI14Q9P0K7 980 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 SNX7Q9UNH6 387 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 EXOC6BQ9Y2D4 811 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 MAGED1Q9Y5V3 778 aaPredicted RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 LOC400499M0QZD8 3231 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 COL1A1P02452 1464 aaPredicted RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 MRC1P22897 1456 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 BPTFQ12830 3046 aa1.23□□□□□ -2.21
LRCH3-209ENST00000452660 CPSF1Q10570 1443 aaKnown RBP1.23□□□□□ -2.21
LRCH3-209ENST00000452660 INSRP06213 1382 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 KMT2EQ8IZD2 1858 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 CCDC7Q96M83 1385 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 PLXNA1Q9UIW2 1896 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 MYO18BQ8IUG5 2567 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 KIF1BO60333 1816 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 FRYQ5TBA9 3013 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 LRRK1Q38SD2 2015 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 IGKV2D-24A0A075B6R9 120 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 KIR2DL5BA0A0G2JN68 375 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 KIR2DL5BA0A0G2JPC4 375 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 LRCOL1A6NCL2 159 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 EFCAB7A8K855 629 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 RTN2O75298 545 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 GRAP2O75791 330 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 LAMP1P11279 417 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 CCL5P13501 91 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 PSMB1P20618 241 aaKnown RBP1.22□□□□□ -2.21
LRCH3-209ENST00000452660 AZGP1P25311 298 aaKnown RBP1.22□□□□□ -2.21
LRCH3-209ENST00000452660 MC5RP33032 325 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 RFC4P35249 363 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 PFN3P60673 137 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 MFGE8Q08431 387 aaPredicted RBP1.22□□□□□ -2.21
LRCH3-209ENST00000452660 CETN1Q12798 172 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 ASAH1Q13510 395 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 PAGE2BQ5JRK9 111 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 LRRC73Q5JTD7 316 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 C1orf189Q5VU69 101 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 ZNF691Q5VV52 312 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 SPATA1Q5VX52 437 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 SLC22A10Q63ZE4 541 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 BTNL8Q6UX41 500 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 C17orf107Q6ZR85 190 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 USP50Q70EL3 339 aaPredicted RBP1.22□□□□□ -2.21
LRCH3-209ENST00000452660 CACUL1Q86Y37 369 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 KIR2DL5AQ8N109 375 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 PI4KAP1Q8N8J0 262 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 TCP11Q8WWU5 503 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 BPIFA2Q96DR5 249 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 SLC25A23Q9BV35 468 aa1.22□□□□□ -2.21
LRCH3-209ENST00000452660 MIS18AQ9NYP9 233 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms