RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 CFAP74Q9C0B2 1584 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 ANAPC1Q9H1A4 1944 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 BAZ2AQ9UIF9 1905 aaKnown RBP0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 DYSFO75923 2080 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 LY75O60449 1722 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 NUP188Q5SRE5 1749 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 MON2Q7Z3U7 1717 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 TNS1Q9HBL0 1735 aaKnown RBP0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 KIAA1551Q9HCM1 1747 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 SVILO95425 2214 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 UNC13CQ8NB66 2214 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 CABIN1Q9Y6J0 2220 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 TMEM131Q92545 1883 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 PLXNA4Q9HCM2 1894 aa0.44□□□□□ -2.34
GTF3C3-203ENST00000416690 HMGXB3Q12766 1538 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TET2Q6N021 2002 aaPredicted RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 CROCC2H7BZ55 1655 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ADAMTSL3P82987 1691 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 CLTCQ00610 1675 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 FREM1Q5H8C1 2179 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ARFGEF3Q5TH69 2177 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 CEP290O15078 2479 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 PTPRBP23467 1997 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TOP2BQ02880 1626 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TARBP1Q13395 1621 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SHROOM2Q13796 1616 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 BIVM-ERCC5R4GMW8 1640 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 COL18A1P39060 1754 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 RGPD4Q7Z3J3 1758 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ADAMTSL1Q8N6G6 1762 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 DLEC1Q9Y238 1755 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 VWA8A3KMH1 1905 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 NBR2O15453 112 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 HTATSF1O43719 755 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TRAF3IP2O43734 574 aaPredicted RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 KIAA0513O60268 411 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ZBED4O75132 1171 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TADA2AO75478 443 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 RBBP9O75884 186 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 BBOX1O75936 387 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SUPT7LO94864 414 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TIMP1P01033 207 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ALPIP09923 528 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SPP1P10451 314 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TCF4P15884 667 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 CTRLP40313 264 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 MTIF2P46199 727 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TIMM10P62072 90 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ABRQ12979 859 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SLAQ13239 276 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ALCAMQ13740 583 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SNTB1Q13884 538 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 FAM46CQ5VWP2 391 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 HSD17B13Q7Z5P4 300 aaPredicted RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 HMGN2P46Q86SG4 172 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ZNF695Q8IW36 515 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ZBTB44Q8NCP5 570 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 NCOA7Q8NI08 942 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 RDH5Q92781 318 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 EXT2Q93063 718 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TIGD1Q96MW7 591 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 RAB40CQ96S21 281 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SPIN2AQ99865 258 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SPIN2BQ9BPZ2 258 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 PLA2G2FQ9BZM2 168 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 KLHL4Q9C0H6 718 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 CARD9Q9H257 536 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 GHITMQ9H3K2 345 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 PTGES2Q9H7Z7 377 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 HAUS2Q9NVX0 235 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ZNF586Q9NXT0 402 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 RNF115Q9Y4L5 304 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 DIDO1Q9BTC0 2240 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 RSF1Q96T23 1441 aaPredicted RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 KDM5CP41229 1560 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 PEG3Q9GZU2 1588 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 DIP2BQ9P265 1576 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 HECW2Q9P2P5 1572 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 COL24A1Q17RW2 1714 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TIAM2Q8IVF5 1701 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 WDR90Q96KV7 1748 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ANKRD26Q9UPS8 1709 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 UBR3Q6ZT12 1888 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SEC16AO15027 2179 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 DOCK10Q96BY6 2186 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 PCNX1Q96RV3 2341 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 WDR62O43379 1518 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 DCAF1Q9Y4B6 1507 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 KDM5AP29375 1690 aaKnown RBP0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 SHPRHQ149N8 1683 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 PLCH1Q4KWH8 1693 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 QRICH2Q9H0J4 1663 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 CAMTA1Q9Y6Y1 1673 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 ZSWIM8A7E2V4 1837 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 PLXNB2O15031 1838 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 TSC2P49815 1807 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 LAMA4Q16363 1823 aa0.43□□□□□ -2.34
GTF3C3-203ENST00000416690 FOCADQ5VW36 1801 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms