RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
GTF3C3-203ENST00000416690 CHIC1Q5VXU3 224 aa12.92□□□□□ -0.34
GTF3C3-203ENST00000416690 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
GTF3C3-203ENST00000416690 PHF23Q9BUL5 403 aaPredicted RBP11.58□□□□□ -0.56
GTF3C3-203ENST00000416690 FOXD1Q16676 465 aa10.97□□□□□ -0.65
GTF3C3-203ENST00000416690 POTEDQ86YR6 584 aa10.31□□□□□ -0.76
GTF3C3-203ENST00000416690 MSH5O43196 834 aa10.3□□□□□ -0.76
GTF3C3-203ENST00000416690 PLPPR3Q6T4P5 718 aa10.25□□□□□ -0.77
GTF3C3-203ENST00000416690 PIAS4Q8N2W9 510 aaPredicted RBP10.19□□□□□ -0.78
GTF3C3-203ENST00000416690 PPP6R1Q9UPN7 881 aa10.15□□□□□ -0.78
GTF3C3-203ENST00000416690 ADRA2BP18089 450 aa10.1□□□□□ -0.79
GTF3C3-203ENST00000416690 MAPK8IP2Q13387 824 aaPredicted RBP9.33□□□□□ -0.92
GTF3C3-203ENST00000416690 DMRT2Q9Y5R5 561 aa9.29□□□□□ -0.92
GTF3C3-203ENST00000416690 SCAF1Q9H7N4 1312 aaKnown RBP9.25□□□□□ -0.93
GTF3C3-203ENST00000416690 PPP4R3CPQ6ZMV5 832 aa8.97□□□□□ -0.97
GTF3C3-203ENST00000416690 CACNB1Q02641 598 aaPredicted RBP8.93□□□□□ -0.98
GTF3C3-203ENST00000416690 DCAF8L1A6NGE4 600 aa8.9□□□□□ -0.98
GTF3C3-203ENST00000416690 HOXD11P31277 338 aaPredicted RBP8.9□□□□□ -0.98
GTF3C3-203ENST00000416690 CNKSR2Q8WXI2 1034 aa8.84□□□□□ -0.99
GTF3C3-203ENST00000416690 RNF39Q9H2S5 420 aa8.79□□□□□ -1
GTF3C3-203ENST00000416690 RNF216Q9NWF9 866 aaPredicted RBP8.79□□□□□ -1
GTF3C3-203ENST00000416690 C1QBPQ07021 282 aaKnown RBP8.65□□□□□ -1.02
GTF3C3-203ENST00000416690 DNAJC5BQ9UF47 199 aa8.63□□□□□ -1.03
GTF3C3-203ENST00000416690 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-203ENST00000416690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.47□□□□□ -1.05
GTF3C3-203ENST00000416690 NPM3O75607 178 aaKnown RBP8.46□□□□□ -1.06
GTF3C3-203ENST00000416690 U3KPZ7 1027 aaPredicted RBP8.28□□□□□ -1.08
GTF3C3-203ENST00000416690 SPINK5Q9NQ38 1064 aaPredicted RBP8.2□□□□□ -1.1
GTF3C3-203ENST00000416690 CAPN15O75808 1086 aa8.19□□□□□ -1.1
GTF3C3-203ENST00000416690 DSG3P32926 999 aa8.19□□□□□ -1.1
GTF3C3-203ENST00000416690 KCNA4P22459 653 aa8.17□□□□□ -1.1
GTF3C3-203ENST00000416690 SLC4A2P04920 1241 aa8.12□□□□□ -1.11
GTF3C3-203ENST00000416690 POTEHQ6S545 545 aa8.05□□□□□ -1.12
GTF3C3-203ENST00000416690 TRHP20396 242 aaPredicted RBP8.03□□□□□ -1.12
GTF3C3-203ENST00000416690 APLP2Q06481 763 aa8.03□□□□□ -1.12
GTF3C3-203ENST00000416690 ZNF219Q9P2Y4 722 aaPredicted RBP8□□□□□ -1.13
GTF3C3-203ENST00000416690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.99□□□□□ -1.13
GTF3C3-203ENST00000416690 HNRNPUL2Q1KMD3 747 aaKnown RBP7.99□□□□□ -1.13
GTF3C3-203ENST00000416690 ABCB7O75027 752 aa7.98□□□□□ -1.13
GTF3C3-203ENST00000416690 SAMD1Q6SPF0 538 aaPredicted RBP7.93□□□□□ -1.14
GTF3C3-203ENST00000416690 MYCNP04198 464 aaPredicted RBP7.82□□□□□ -1.16
GTF3C3-203ENST00000416690 RBM42Q9BTD8 480 aaKnown RBP7.8□□□□□ -1.16
GTF3C3-203ENST00000416690 POLA2Q14181 598 aa7.78□□□□□ -1.16
GTF3C3-203ENST00000416690 CHRDL2Q6WN34 429 aa7.69□□□□□ -1.18
GTF3C3-203ENST00000416690 SLC4A1APQ9BWU0 796 aaKnown RBP7.68□□□□□ -1.18
GTF3C3-203ENST00000416690 FOXD4L1Q9NU39 408 aa7.66□□□□□ -1.18
GTF3C3-203ENST00000416690 ATF5Q9Y2D1 282 aaPredicted RBP7.66□□□□□ -1.18
GTF3C3-203ENST00000416690 AKT1S1Q96B36 256 aa7.6□□□□□ -1.19
GTF3C3-203ENST00000416690 ZBTB12Q9Y330 459 aaPredicted RBP7.6□□□□□ -1.19
GTF3C3-203ENST00000416690 REM2Q8IYK8 340 aaPredicted RBP7.53□□□□□ -1.2
GTF3C3-203ENST00000416690 OSCARQ8IYS5 282 aa7.52□□□□□ -1.21
GTF3C3-203ENST00000416690 ZBTB22O15209 634 aa7.5□□□□□ -1.21
GTF3C3-203ENST00000416690 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
GTF3C3-203ENST00000416690 SP7Q8TDD2 431 aaPredicted RBP7.48□□□□□ -1.21
GTF3C3-203ENST00000416690 ATXN8OSP0DMR3 200 aa7.45□□□□□ -1.22
GTF3C3-203ENST00000416690 PITPNM1O00562 1244 aa7.44□□□□□ -1.22
GTF3C3-203ENST00000416690 FXR2P51116 673 aaKnown RBP eCLIP7.42□□□□□ -1.22
GTF3C3-203ENST00000416690 HAX1O00165 279 aa7.39□□□□□ -1.23
GTF3C3-203ENST00000416690 SPDYE2BA6NHP3 402 aa7.37□□□□□ -1.23
GTF3C3-203ENST00000416690 SPDYE6P0CI01 402 aa7.37□□□□□ -1.23
GTF3C3-203ENST00000416690 SPDYE2Q495Y8 402 aa7.37□□□□□ -1.23
GTF3C3-203ENST00000416690 FBLN2P98095 1184 aa7.36□□□□□ -1.23
GTF3C3-203ENST00000416690 MKRN4PQ13434 485 aaPredicted RBP7.3□□□□□ -1.24
GTF3C3-203ENST00000416690 EVX2Q03828 476 aa7.29□□□□□ -1.24
GTF3C3-203ENST00000416690 SPDYE1Q8NFV5 336 aaPredicted RBP7.27□□□□□ -1.25
GTF3C3-203ENST00000416690 CLEC11AQ9Y240 323 aa7.27□□□□□ -1.25
GTF3C3-203ENST00000416690 PRKAR2AP13861 404 aaKnown RBP7.26□□□□□ -1.25
GTF3C3-203ENST00000416690 ZNF692Q9BU19 519 aaPredicted RBP7.26□□□□□ -1.25
GTF3C3-203ENST00000416690 SSUH2Q9Y2M2 353 aa7.25□□□□□ -1.25
GTF3C3-203ENST00000416690 C19orf67A6NJJ6 358 aa7.18□□□□□ -1.26
GTF3C3-203ENST00000416690 CHADLQ6NUI6 762 aa7.15□□□□□ -1.26
GTF3C3-203ENST00000416690 PABPN1Q86U42 306 aaKnown RBP eCLIP7.14□□□□□ -1.27
GTF3C3-203ENST00000416690 PRR29P0C7W0 189 aa7.13□□□□□ -1.27
GTF3C3-203ENST00000416690 GABBR2O75899 941 aa7.12□□□□□ -1.27
GTF3C3-203ENST00000416690 CSRNP3Q8WYN3 585 aa7.05□□□□□ -1.28
GTF3C3-203ENST00000416690 LHX8Q68G74 356 aa7.02□□□□□ -1.29
GTF3C3-203ENST00000416690 FARP1Q9Y4F1 1045 aaPredicted RBP7.02□□□□□ -1.29
GTF3C3-203ENST00000416690 CD44P16070 742 aaKnown RBP7.01□□□□□ -1.29
GTF3C3-203ENST00000416690 POTEIP0CG38 1075 aa6.97□□□□□ -1.29
GTF3C3-203ENST00000416690 CLCN6P51797 869 aa6.96□□□□□ -1.3
GTF3C3-203ENST00000416690 STAG3Q9UJ98 1225 aa6.93□□□□□ -1.3
GTF3C3-203ENST00000416690 CREBZFQ9NS37 354 aa6.92□□□□□ -1.3
GTF3C3-203ENST00000416690 ZNF579Q8NAF0 562 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-203ENST00000416690 ZRANB1Q9UGI0 708 aa6.9□□□□□ -1.3
GTF3C3-203ENST00000416690 DCBLD2Q96PD2 775 aa6.89□□□□□ -1.31
GTF3C3-203ENST00000416690 SPDYE4A6NLX3 237 aa6.87□□□□□ -1.31
GTF3C3-203ENST00000416690 EHMT2Q96KQ7 1210 aa6.85□□□□□ -1.31
GTF3C3-203ENST00000416690 GALR2O43603 387 aaPredicted RBP6.83□□□□□ -1.32
GTF3C3-203ENST00000416690 PAK3O75914 559 aaPredicted RBP6.8□□□□□ -1.32
GTF3C3-203ENST00000416690 NPM1P06748 294 aaKnown RBP eCLIP6.79□□□□□ -1.32
GTF3C3-203ENST00000416690 MNX1P50219 401 aaPredicted RBP6.79□□□□□ -1.32
GTF3C3-203ENST00000416690 PHF12Q96QT6 1004 aa6.78□□□□□ -1.32
GTF3C3-203ENST00000416690 POTEB2H3BUK9 544 aa6.74□□□□□ -1.33
GTF3C3-203ENST00000416690 OTUD5Q96G74 571 aa6.74□□□□□ -1.33
GTF3C3-203ENST00000416690 PELP1Q8IZL8 1130 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-203ENST00000416690 PROM2Q8N271 834 aa6.69□□□□□ -1.34
GTF3C3-203ENST00000416690 MS4A3Q96HJ5 214 aa6.69□□□□□ -1.34
GTF3C3-203ENST00000416690 ASTLQ6HA08 431 aaPredicted RBP6.68□□□□□ -1.34
GTF3C3-203ENST00000416690 PLSCR2Q9NRY7 297 aa6.67□□□□□ -1.34
GTF3C3-203ENST00000416690 ATMINO43313 823 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms