RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 STSP08842 583 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 CNR2P34972 360 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 CDH11P55287 796 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 TCTE1Q5JU00 501 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 IRAK1BP1Q5VVH5 260 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 SLC27A4Q6P1M0 643 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 TBPL2Q6SJ96 375 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 SLC36A4Q6YBV0 504 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF671Q8TAW3 534 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ITPAQ9BY32 194 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.24□□□□□ -0.29
SCAF4-202ENST00000399804 SLC6A13Q9NSD5 602 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 SLC17A4Q9Y2C5 497 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 A0A1B0GTW7 788 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 HCN1O60741 890 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 PAPLNO95428 1278 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 CSTAP01040 98 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 CSTF2P33240 577 aaKnown RBP eCLIP13.24□□□□□ -0.296e-21■■■■■ 32.8
SCAF4-202ENST00000399804 PMS2P3Q13401 168 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 CCNJQ5T5M9 372 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 JAZF1Q86VZ6 243 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ABHD11Q8NFV4 315 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 OR6K6Q8NGW6 343 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 AMDHD1Q96NU7 426 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 FOXQ1Q9C009 403 aa13.24□□□□□ -0.29
SCAF4-202ENST00000399804 MRPS7Q9Y2R9 242 aaKnown RBP13.24□□□□□ -0.29
SCAF4-202ENST00000399804 ASCC3Q8N3C0 2202 aaKnown RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 PDCD11Q14690 1871 aaKnown RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 PCDH17O14917 1159 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 ADAP00813 363 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 CRTC2Q53ET0 693 aaPredicted RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 OLIG3Q7RTU3 272 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 CACTIN-AS1Q8N1I8 211 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 VWA5B2Q8N398 1253 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 FBXL6Q8N531 539 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 CDRT4Q8N9R6 151 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 POC5Q8NA72 575 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 LRIT1Q9P2V4 623 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 SUSD2Q9UGT4 822 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 PLCL2Q9UPR0 1127 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 XKRYO14609 159 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 ANKRD28O15084 1053 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 GABRG2P18507 467 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 COL9A1P20849 921 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 PSMA3P25788 255 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 CSRP3P50461 194 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 MADCAM1Q13477 382 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 TUBA3CQ13748 450 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 ERV3-1Q14264 604 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 EXOSC7Q15024 291 aaKnown RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 LTB4RQ15722 352 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 TRIQKQ629K1 86 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 FAM220AQ7Z4H9 259 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 OR8J1Q8NGP2 316 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 GNPDA2Q8TDQ7 276 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 SNX33Q8WV41 574 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 NR4A3Q92570 626 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 TAMM41Q96BW9 452 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 MS4A6EQ96DS6 147 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 EPYCQ99645 322 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 QRSL1Q9H0R6 528 aaKnown RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 TMEM9Q9P0T7 183 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 IKZF2Q9UKS7 526 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 ZSWIM8A7E2V4 1837 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 NPIPA5A0A0B4J1W7 369 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 NPIPA7E9PJI5 369 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 SLC22A1O15245 554 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 TMCC2O75069 709 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 GPR75O95800 540 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 KRT8P05787 483 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 NPIPA8P0DM63 369 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 SRFP11831 508 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 NRG3P56975 720 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 RPS3AP61247 264 aaKnown RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 GPR19Q15760 415 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 SLC30A6Q6NXT4 461 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 KIAA0907Q7Z7F0 614 aaPredicted RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 TP53I13Q8NBR0 393 aaPredicted RBP13.23□□□□□ -0.29
SCAF4-202ENST00000399804 TANKQ92844 425 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 CDS1Q92903 461 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 SLC25A36Q96CQ1 311 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 ZNF354BQ96LW1 612 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 OR7D2Q96RA2 312 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 NRTNQ99748 197 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 MARCH7Q9H992 704 aa13.23□□□□□ -0.29
SCAF4-202ENST00000399804 M0R129 80 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 CHST10O43529 356 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 NARSO43776 548 aaKnown RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 TRIM23P36406 574 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 GPR4P46093 362 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 SMAD4Q13485 552 aaKnown RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 TSTQ16762 297 aaKnown RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 MEX3DQ86XN8 651 aaKnown RBP13.22□□□□□ -0.29
SCAF4-202ENST00000399804 OSTF1Q92882 214 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 NEURL3Q96EH8 262 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
SCAF4-202ENST00000399804 OLAHQ9NV23 265 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms