RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ALPPL2P10696 532 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 MYOGP15173 224 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 WNT4P56705 351 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 TAS2R38P59533 333 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 BNC1Q01954 994 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 TMEM240Q5SV17 173 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 FAM131AQ6UXB0 335 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 LAPTM4BQ86VI4 370 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 MEX3DQ86XN8 651 aaKnown RBP23.83■■□□□ 1.4
C9orf40-201ENST00000376854 KIF18BQ86Y91 864 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 SUN3Q8TAQ9 357 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 TP63Q9H3D4 680 aaPredicted RBP23.83■■□□□ 1.4
C9orf40-201ENST00000376854 KLHL31Q9H511 634 aa23.83■■□□□ 1.4
C9orf40-201ENST00000376854 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.83■■□□□ 1.4
C9orf40-201ENST00000376854 LINC00854A0A1B0GVQ3 168 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 A0A1W2PQ09 198 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 LINC01553A4QN01 128 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 AP3D1O14617 1153 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 GSTM3P21266 225 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 OR2G6Q5TZ20 316 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 RAB43Q86YS6 212 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 RAB42Q8N4Z0 105 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 CLDN22Q8N7P3 220 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 HDAC8Q9BY41 377 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 XKR8Q9H6D3 395 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 NR2F6P10588 404 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 MAN2A2P49641 1150 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 ANXA11P50995 505 aaKnown RBP23.82■■□□□ 1.4
C9orf40-201ENST00000376854 GAS1P54826 345 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 PRDX1Q06830 199 aaKnown RBP23.82■■□□□ 1.4
C9orf40-201ENST00000376854 TAB1Q15750 504 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 WSCD2Q2TBF2 565 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 GPAT3Q53EU6 434 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 ATAD3CQ5T2N8 411 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 KIAA1161Q6NSJ0 714 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 TMEM163Q8TC26 289 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 RNFT2Q96EX2 444 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 MACROD1Q9BQ69 325 aa23.82■■□□□ 1.4
C9orf40-201ENST00000376854 PLEKHB1Q9UF11 243 aaPredicted RBP23.82■■□□□ 1.4
C9orf40-201ENST00000376854 YARS2Q9Y2Z4 477 aaKnown RBP23.82■■□□□ 1.4
C9orf40-201ENST00000376854 DNMT3AQ9Y6K1 912 aaPredicted RBP23.82■■□□□ 1.4
C9orf40-201ENST00000376854 HMGN2P05204 90 aaKnown RBP23.81■■□□□ 1.4
C9orf40-201ENST00000376854 ACP2P11117 423 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 GNA13Q14344 377 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 SLC9A5Q14940 896 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 SUSD6Q92537 303 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 RAB7BQ96AH8 199 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 C12orf66Q96MD2 445 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 QRSL1Q9H0R6 528 aaKnown RBP23.81■■□□□ 1.4
C9orf40-201ENST00000376854 A0A1W2PQL4 384 aaPredicted RBP23.81■■□□□ 1.4
C9orf40-201ENST00000376854 PRODHO43272 600 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 UBE3AQ05086 875 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 RAB40BQ12829 278 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 SLAMF1Q13291 335 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 ZNF750Q32MQ0 723 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 GLYR1Q49A26 553 aaPredicted RBP23.81■■□□□ 1.4
C9orf40-201ENST00000376854 FAM78AQ5JUQ0 283 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 BHLHB9Q6PI77 547 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 SLC36A4Q6YBV0 504 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 TMEM64Q6YI46 380 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 FAM181AQ8N9Y4 354 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 TEX47Q8TBZ9 253 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 SLC9A6Q92581 669 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 MSLNLQ96KJ4 702 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 KCTD7Q96MP8 289 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 MIXL1Q9H2W2 232 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 OSGEPL1Q9H4B0 414 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 GPR52Q9Y2T5 361 aa23.81■■□□□ 1.4
C9orf40-201ENST00000376854 A0A0G2JPF8 293 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 HNRNPCL2B2RXH8 293 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 HNRNPCL3B7ZW38 293 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 STK25O00506 426 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 PGRMC2O15173 223 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 CASC3O15234 703 aaKnown RBP23.8■■□□□ 1.4
C9orf40-201ENST00000376854 NFATC1O95644 943 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 HNRNPCL4P0DMR1 293 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 RPS25P62851 125 aaKnown RBP23.8■■□□□ 1.4
C9orf40-201ENST00000376854 SCN1BQ07699 218 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 PLK5Q496M5 336 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 TMEM35AQ53FP2 167 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 PIP5KL1Q5T9C9 394 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 SLC27A4Q6P1M0 643 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 UTS2BQ765I0 119 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 FAM20CQ8IXL6 584 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 TTLQ8NG68 377 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 GATAD2BQ8WXI9 593 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 SMG7Q92540 1137 aaKnown RBP23.8■■□□□ 1.4
C9orf40-201ENST00000376854 TM9SF4Q92544 642 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 C1GALT1C1Q96EU7 318 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 INSM2Q96T92 566 aaPredicted RBP23.8■■□□□ 1.4
C9orf40-201ENST00000376854 PRR14Q9BWN1 585 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 PINK1Q9BXM7 581 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 SAP130Q9H0E3 1048 aa23.8■■□□□ 1.4
C9orf40-201ENST00000376854 MRPS18AQ9NVS2 196 aaKnown RBP23.8■■□□□ 1.4
C9orf40-201ENST00000376854 A0A087WUU8 490 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 SDC2P34741 201 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 BCL6P41182 706 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 SLC9A3P48764 834 aa23.79■■□□□ 1.4
C9orf40-201ENST00000376854 MLF2Q15773 248 aaPredicted RBP23.79■■□□□ 1.4
C9orf40-201ENST00000376854 C11orf74Q86VG3 221 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms