RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 MRPL1Q9BYD6 325 aaKnown RBP12.55□□□□□ -0.4
CXCL12-202ENST00000374426 NOL11Q9H8H0 719 aaKnown RBP12.55□□□□□ -0.4
CXCL12-202ENST00000374426 NEUROD4Q9HD90 331 aa12.55□□□□□ -0.4
CXCL12-202ENST00000374426 SERHLQ9NQF3 203 aa12.55□□□□□ -0.4
CXCL12-202ENST00000374426 GALNT8Q9NY28 637 aa12.55□□□□□ -0.4
CXCL12-202ENST00000374426 CES1P1Q9UKY3 287 aa12.55□□□□□ -0.4
CXCL12-202ENST00000374426 TNPO3Q9Y5L0 923 aaKnown RBP12.55□□□□□ -0.4
CXCL12-202ENST00000374426 SH3D21A4FU49 640 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 KLHL2O95198 593 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 RCBTB2O95199 551 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 INHBBP09529 407 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 PLTPP55058 493 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 EXOSC7Q15024 291 aaKnown RBP12.54□□□□□ -0.4
CXCL12-202ENST00000374426 TRADDQ15628 312 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 PRICKLE4Q2TBC4 344 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 C6orf163Q5TEZ5 329 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 FRG2Q64ET8 278 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 SLC30A6Q6NXT4 461 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 METTL2BQ6P1Q9 378 aaKnown RBP12.54□□□□□ -0.4
CXCL12-202ENST00000374426 NUP54Q7Z3B4 507 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-202ENST00000374426 MED12LQ86YW9 2145 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 WDSUB1Q8N9V3 476 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 FBXO25Q8TCJ0 367 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 ISL2Q96A47 359 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 OMA1Q96E52 524 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 ZFP3Q96NJ6 502 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 FRG2BQ96QU4 278 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 UCN2Q96RP3 112 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 ITPAQ9BY32 194 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 OR2B2Q9GZK3 357 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 BEX4Q9NWD9 120 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-202ENST00000374426 MAT2BQ9NZL9 334 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 EHD3Q9NZN3 535 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 CPSF2Q9P2I0 782 aaKnown RBP12.54□□□□□ -0.4
CXCL12-202ENST00000374426 ZNF639Q9UID6 485 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 ADAM29Q9UKF5 820 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 MAPRE3Q9UPY8 281 aa12.54□□□□□ -0.4
CXCL12-202ENST00000374426 EXO1Q9UQ84 846 aaKnown RBP12.54□□□□□ -0.4
CXCL12-202ENST00000374426 ATRQ13535 2644 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 ROS1P08922 2347 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 A0A096LPK6 155 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 H0Y3Z8 333 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 UGT2B11O75310 529 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 CBR3O75828 277 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 CBX7O95931 251 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 ALDOAP04075 364 aaKnown RBP12.53□□□□□ -0.4
CXCL12-202ENST00000374426 ATP1B1P05026 303 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 RHOXF2BP0C7M4 288 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 CNTFP26441 200 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 ADSLP30566 484 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-202ENST00000374426 ARL1P40616 181 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-202ENST00000374426 CPA2P48052 419 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 GFRA1P56159 465 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 NKX6-1P78426 367 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-202ENST00000374426 GUCY2DQ02846 1103 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 SRYQ05066 204 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 PLCXD2Q0VAA5 305 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 MAP4K2Q12851 820 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 TRAF3Q13114 568 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 SNTA1Q13424 505 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 CCNYL2Q5T2Q4 361 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 SLC48A1Q6P1K1 146 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 ZDHHC24Q6UX98 284 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 PAGE2Q7Z2X7 111 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 TRIM42Q8IWZ5 723 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 METTL4Q8N3J2 472 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 OR14L1PQ8NHC6 308 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 SMPDL3BQ92485 455 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 WNT2BQ93097 391 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 INTS12Q96CB8 462 aaKnown RBP12.53□□□□□ -0.4
CXCL12-202ENST00000374426 MRRFQ96E11 262 aaKnown RBP12.53□□□□□ -0.4
CXCL12-202ENST00000374426 LCORQ96JN0 433 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-202ENST00000374426 TM9SF2Q99805 663 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 BRINP2Q9C0B6 783 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 KLRF1Q9NZS2 232 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 CLCF1Q9UBD9 225 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 BCAP29Q9UHQ4 241 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 CFL2Q9Y281 166 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 PCDHA9Q9Y5H5 950 aa12.53□□□□□ -0.4
CXCL12-202ENST00000374426 COL6A5A8TX70 2615 aa12.52□□□□□ -0.4
CXCL12-202ENST00000374426 PRAMEF25A6NGN4 478 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 ACOX3O15254 700 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 GCKP35557 465 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 FEN1P39748 380 aaKnown RBP12.52□□□□□ -0.41
CXCL12-202ENST00000374426 STARP49675 285 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 CCNG1P51959 295 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 MAPK12P53778 367 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 CAV1Q03135 178 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 DUSP2Q05923 314 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 C2orf54Q08AI8 447 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 TECRLQ5HYJ1 363 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 SHEQ5VZ18 495 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 KLC3Q6P597 504 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 ENPP6Q6UWR7 440 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 CLEC9AQ6UXN8 241 aa12.52□□□□□ -0.41
CXCL12-202ENST00000374426 COMMD6Q7Z4G1 85 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms