RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ATOH1Q92858 354 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 C11orf24Q96F05 449 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 NPAS1Q99742 590 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 ARHGAP9Q9BRR9 750 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 MS4A7Q9GZW8 240 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 BRD7Q9NPI1 651 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 ZNF275Q9NSD4 429 aaPredicted RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 GPATCH2Q9NW75 528 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 TMEM161AQ9NX61 479 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 CPNE7Q9UBL6 633 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 CBLCQ9ULV8 474 aa9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 EXOSC1Q9Y3B2 195 aaKnown RBP9.77□□□□□ -0.85
CHRNA1-202ENST00000348749 FAM25EA8MYX2 175 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 RNASET2O00584 256 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 SOX14O95416 240 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 IFNW1P05000 195 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 TFPIP10646 304 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 ETFAP13804 333 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 GALP22466 123 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 CST5P28325 142 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 SGSHP51688 502 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 PCBP3P57721 371 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 RAB40BQ12829 278 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 COX10Q12887 443 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 DUSP4Q13115 394 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 ETFDHQ16134 617 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 GSG1Q2KHT4 349 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 ZNF630Q2M218 657 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 CYP27C1Q4G0S4 372 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 COX20Q5RI15 118 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 CPTPQ5TA50 214 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 OR2G6Q5TZ20 316 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 MFSD14CQ5VZR4 134 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 C17orf99Q6UX52 265 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 UNC5DQ6UXZ4 953 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 WASH2PQ6VEQ5 465 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 HSD17B13Q7Z5P4 300 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 RTN4RL1Q86UN2 441 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 FTMTQ8N4E7 242 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 EIF4E3Q8N5X7 224 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 NEIL3Q8TAT5 605 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 ADAMTS19Q8TE59 1207 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 HSD17B8Q92506 261 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 FGF11Q92914 225 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 SIPA1Q96FS4 1042 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 SCRN2Q96FV2 425 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 ZNF582Q96NG8 517 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 OR4K3Q96R72 315 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 C1QTNF6Q9BXI9 259 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 KLF16Q9BXK1 252 aaPredicted RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 ENAMQ9NRM1 1142 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 IMP3Q9NV31 184 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 HPF1Q9NWY4 346 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 PFDN2Q9UHV9 154 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 NOSIPQ9Y314 301 aaKnown RBP9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 PPIL1Q9Y3C6 166 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 KIAA1671Q9BY89 1806 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 PLXNB3Q9ULL4 1909 aa9.76□□□□□ -0.85
CHRNA1-202ENST00000348749 TRBV4-1A0A0J9YWV2 114 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 TRBC2A0A5B9 178 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SHISA3A0PJX4 238 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 OR6C65A6NJZ3 312 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 H0YIV9 168 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 FAAHO00519 579 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 LRRTM2O43300 516 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 GMDSO60547 372 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 TSPAN3O60637 253 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ADAM11O75078 769 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ADAMTS4O75173 837 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 NCR1O76036 304 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 GJB5O95377 273 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 HLA-DPB1P04440 258 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 NMBP08949 121 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ACP2P11117 423 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 HNF1BP35680 557 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CHI3L1P36222 383 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 RPL3P39023 403 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 MAPK9P45984 424 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 DGKEP52429 567 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 VSX2P58304 361 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 RPL6Q02878 288 aaKnown RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ACSM2AQ08AH3 577 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 PTPRRQ15256 657 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SEC23BQ15437 767 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ST3GAL2Q16842 350 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 SPDYE7PQ495Y7 208 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ACSM2BQ68CK6 577 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 KIAA1211LQ6NV74 962 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 LINGO4Q6UY18 593 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 MARCH9Q86YJ5 346 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 CMIPQ8IY22 773 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ZNF485Q8NCK3 441 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 DBF4BQ8NFT6 615 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 WDR20Q8TBZ3 569 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 GATAD2BQ8WXI9 593 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 ALG14Q96F25 216 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 GPR62Q9BZJ7 368 aa9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 BHLHE41Q9C0J9 482 aaPredicted RBP9.75□□□□□ -0.85
CHRNA1-202ENST00000348749 OSGEPL1Q9H4B0 414 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms