RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 AGBL4Q5VU57 503 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 VRK2Q86Y07 508 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 NATD1Q8N6N6 113 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 OR52I1Q8NGK6 324 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 GATAD2BQ8WXI9 593 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 ARMC5Q96C12 935 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 SLC13A4Q9UKG4 626 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 PTTG1O95997 202 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 TOR1AIP1Q5JTV8 583 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 FAM92BQ6ZTR7 304 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 PHC2Q8IXK0 858 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 OR52E1Q8NGJ3 308 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 OTULINQ96BN8 352 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 C1GALT1C1Q96EU7 318 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 SLC6A17Q9H1V8 727 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 SYNPO2LQ9H987 977 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 ACSL5Q9ULC5 683 aa16.4■□□□□ 0.22
COL9A1-201ENST00000320755 GPR55Q9Y2T6 319 aaPredicted RBP16.4■□□□□ 0.22
COL9A1-201ENST00000320755 A0A1W2PRQ8 180 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 NARSO43776 548 aaKnown RBP16.39■□□□□ 0.22
COL9A1-201ENST00000320755 CLEC3AO75596 197 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 GJA4P35212 333 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 MC3RP41968 323 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 KHKP50053 298 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 RORCP51449 518 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 CHRNEQ04844 493 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 MEDAGQ5VYS4 303 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 TMPRSS11AQ6ZMR5 421 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 RRM2BQ7LG56 351 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 UBE2J2Q8N2K1 259 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 OR9A2Q8NGT5 310 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 RAB7BQ96AH8 199 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 PRKAG2Q9UGJ0 569 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 ENTPD4Q9Y227 616 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 STON1Q9Y6Q2 735 aa16.39■□□□□ 0.22
COL9A1-201ENST00000320755 MDC1Q14676 2089 aaKnown RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 AIFM1O95831 613 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 DRD2P14416 443 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 HIST1H1TP22492 207 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 RNF144AP50876 292 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 DBPQ10586 325 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 SGCGQ13326 291 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 LRRC32Q14392 662 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 LTB4RQ15722 352 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 ZNF311Q5JNZ3 666 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 TYW3Q6IPR3 259 aaKnown RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 RD3Q7Z3Z2 195 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 NRARPQ7Z6K4 114 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 TRIM69Q86WT6 500 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 MS4A6EQ96DS6 147 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 DHRS1Q96LJ7 313 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 ZNF582Q96NG8 517 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 NEDD4LQ96PU5 975 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 RACGAP1Q9H0H5 632 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 SEC14L4Q9UDX3 406 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 ACAD8Q9UKU7 415 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 STUB1Q9UNE7 303 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 TRANK1O15050 2925 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 ISM1B1AKI9 464 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 TFECO14948 347 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 SLC31A1O15431 190 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 TBX19O60806 448 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 TSPAN19P0C672 248 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 KIF18BQ86Y91 864 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 CAMKK1Q8N5S9 505 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 PROKR2Q8NFJ6 384 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 OR14C36Q8NHC7 312 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 FAM46AQ96IP4 442 aaKnown RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 TM9SF2Q99805 663 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 C6orf106Q9H6K1 298 aaPredicted RBP16.39■□□□□ 0.21
COL9A1-201ENST00000320755 SLC6A20Q9NP91 592 aa16.39■□□□□ 0.21
COL9A1-201ENST00000320755 A0A087WUU8 490 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 LGI1O95970 557 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 MYL12AP19105 171 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 CAV3P56539 151 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 ARMC4Q5T2S8 1044 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 ZNF730Q6ZMV8 503 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 RTL10Q7L3V2 364 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 PRICKLE2Q7Z3G6 844 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 LHFPL3Q86UP9 236 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 SUN3Q8TAQ9 357 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 PIK3R3Q92569 461 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 IGFLR1Q9H665 355 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 PHPT1Q9NRX4 125 aaPredicted RBP16.38■□□□□ 0.21
COL9A1-201ENST00000320755 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 THAP10Q9P2Z0 257 aaPredicted RBP16.38■□□□□ 0.21
COL9A1-201ENST00000320755 ZFR2Q9UPR6 939 aaKnown RBP16.38■□□□□ 0.21
COL9A1-201ENST00000320755 AP3D1O14617 1153 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 SLITRK5O94991 958 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 SNX4O95219 450 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 ATP5A1P25705 553 aaKnown RBP16.38■□□□□ 0.21
COL9A1-201ENST00000320755 HNRNPA0Q13151 305 aaKnown RBP16.38■□□□□ 0.21
COL9A1-201ENST00000320755 LRIT3Q3SXY7 679 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 TMEM201Q5SNT2 666 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 SYT14Q8NB59 555 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 OR4E2Q8NGC2 313 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 FUZQ9BT04 418 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 SIAEQ9HAT2 523 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 TAS2R7Q9NYW3 318 aa16.38■□□□□ 0.21
COL9A1-201ENST00000320755 ADAM29Q9UKF5 820 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms