RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 MSGN1A6NI15 193 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 NPIPA3F8WFD2 350 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CCL16O15467 120 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 MAGEB2O15479 319 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 SEC22BO75396 215 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 SORBS2O94875 1100 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 IL10P22301 178 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CHMLP26374 656 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CALRP27797 417 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 HOXA9P31269 272 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CSTF2P33240 577 aaKnown RBP eCLIP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 SERPINB6P35237 376 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CETN2P41208 172 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CXCL12P48061 93 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 MAZP56270 477 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 HERV-K104P61576 105 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 SNRPD1P62314 119 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 RASGEF1BQ0VAM2 473 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CETN1Q12798 172 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CEP55Q53EZ4 464 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 SLC35D3Q5M8T2 416 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 FAM46CQ5VWP2 391 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 TWF2Q6IBS0 349 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 FAM166AQ6J272 317 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 PRSS55Q6UWB4 352 aaPredicted RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CWC27Q6UX04 472 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 STXBP4Q6ZWJ1 553 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 GPR141Q7Z602 305 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 RABEPKQ7Z6M1 372 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 CNTN4Q8IWV2 1026 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 APCDD1Q8J025 514 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 KIAA0895Q8NCT3 520 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 OR4C3Q8NH37 302 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 URGCPQ8TCY9 931 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 ING5Q8WYH8 240 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 FAM3CQ92520 227 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 PANX3Q96QZ0 392 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 MCRIP2Q9BUT9 160 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 KRT23Q9C075 422 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 UBQLN3Q9H347 655 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 KLK13Q9UKR3 277 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 STUB1Q9UNE7 303 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 PIN4Q9Y237 131 aaKnown RBP4.12□□□□□ -1.75
TRA2B-201ENST00000259043 ATG2BQ96BY7 2078 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 MYO9AB2RTY4 2548 aa4.12□□□□□ -1.75
TRA2B-201ENST00000259043 TSC2P49815 1807 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 ATMQ13315 3056 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 RNF103-CHMP3A0A140T963 221 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 RNF103O00237 685 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CDX4O14627 284 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CDC123O75794 336 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 SERPING1P05155 500 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 GAP43P17677 238 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CA6P23280 308 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CCNE1P24864 410 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 MAPK3P27361 379 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TMOD1P28289 359 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 HOXA6P31267 233 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 KIF5BP33176 963 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 SFTPDP35247 375 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CCR2P41597 374 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 MAGEA11P43364 429 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 OR1G1P47890 313 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 SERPINH1P50454 418 aaKnown RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 BPIFB3P59826 476 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CDR2Q01850 454 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 SLC34A1Q06495 639 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TRAP1Q12931 704 aaKnown RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 IMMTQ16891 758 aaKnown RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 SPDYCQ5MJ68 293 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 LIN9Q5TKA1 542 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 VITQ6UXI7 678 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 NIPA1Q7RTP0 329 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 PLA2G4DQ86XP0 818 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 GPR65Q8IYL9 337 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TMEM178AQ8NBL3 297 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 OR10Q1Q8NGQ4 319 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 OR52N5Q8NH56 324 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 ELSPBP1Q96BH3 223 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TCEAL4Q96EI5 215 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TSSK2Q96PF2 358 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 MAP3K3Q99759 626 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 VGLL1Q99990 258 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 RBM4BQ9BQ04 359 aaKnown RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 EDEM2Q9BV94 578 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 GCOM2Q9BZD3 368 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 ABCG8Q9H221 673 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CXCL16Q9H2A7 254 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CUEDC2Q9H467 287 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 RNF121Q9H920 327 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TRPV5Q9NQA5 729 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 GPR173Q9NS66 373 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 FAM207AQ9NSI2 230 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 AGPAT5Q9NUQ2 364 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 TDRKHQ9Y2W6 561 aaKnown RBP4.11□□□□□ -1.75
TRA2B-201ENST00000259043 NEUROG3Q9Y4Z2 214 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 HES2Q9Y543 173 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 SMAD5-AS1Q9Y6J3 95 aa4.11□□□□□ -1.75
TRA2B-201ENST00000259043 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms