RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 LASP1Q14847 261 aaKnown RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 WSCD2Q2TBF2 565 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 GLYR1Q49A26 553 aaPredicted RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 ZNF517Q6ZMY9 492 aaPredicted RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 FAM181AQ8N9Y4 354 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 RAB7BQ96AH8 199 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 FERD3LQ96RJ6 166 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 HDAC8Q9BY41 377 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 MIXL1Q9H2W2 232 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 RERGLQ9H628 205 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 ZDHHC4Q9NPG8 344 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 PLEKHB1Q9UF11 243 aaPredicted RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 A0A087WUU8 490 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 A0A1W2PQ09 198 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 ANTXRLA6NF34 631 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 C1QTNF3-AMACRE9PGA6 284 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 STK25O00506 426 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 PGRMC2O15173 223 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 TSPAN19P0C672 248 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 NR2F6P10588 404 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 ALPPL2P10696 532 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 ACP2P11117 423 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 UBE3AQ05086 875 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 RAB40BQ12829 278 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 SLC9A5Q14940 896 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 PLK5Q496M5 336 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 OR2G6Q5TZ20 316 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 TMEM64Q6YI46 380 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 MEX3DQ86XN8 651 aaKnown RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 RAB43Q86YS6 212 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 OR2A1Q8NGT9 310 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 TMEM163Q8TC26 289 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 TM9SF4Q92544 642 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 ZNF707Q96C28 371 aaPredicted RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 EGLN3Q9H6Z9 239 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 FGF20Q9NP95 211 aaPredicted RBP14.35□□□□□ -0.11
DDX56-201ENST00000258772 N6AMT1Q9Y5N5 214 aa14.35□□□□□ -0.11
DDX56-201ENST00000258772 SNRNP200O75643 2136 aaKnown RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 A0A0G2JPF8 293 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 A0A1W2PQL4 384 aaPredicted RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 HNRNPCL2B2RXH8 293 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 HNRNPCL3B7ZW38 293 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 CASC3O15234 703 aaKnown RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 PRODHO43272 600 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 APOL3O95236 402 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 STATHP02808 62 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 HNRNPCL4P0DMR1 293 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 SDC2P34741 201 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 SLC9A3P48764 834 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 SCN1BQ07699 218 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 GNA13Q14344 377 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 MLF2Q15773 248 aaPredicted RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 ZNF750Q32MQ0 723 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 ATAD3CQ5T2N8 411 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 PIP5KL1Q5T9C9 394 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 FAM131AQ6UXB0 335 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 CCDC116Q8IYX3 515 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 SUSD6Q92537 303 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 SLC9A6Q92581 669 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 KCTD7Q96MP8 289 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 INSM2Q96T92 566 aaPredicted RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 MACROD1Q9BQ69 325 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 PRR14Q9BWN1 585 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 PINK1Q9BXM7 581 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 SAP130Q9H0E3 1048 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 QRSL1Q9H0R6 528 aaKnown RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 XKR8Q9H6D3 395 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 ACSL5Q9ULC5 683 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 YARS2Q9Y2Z4 477 aaKnown RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 SF3B6Q9Y3B4 125 aaKnown RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 KCNE3Q9Y6H6 103 aa14.34□□□□□ -0.11
DDX56-201ENST00000258772 MDC1Q14676 2089 aaKnown RBP14.34□□□□□ -0.11
DDX56-201ENST00000258772 LINC00854A0A1B0GVQ3 168 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 TMEM129A0AVI4 362 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 NFATC1O95644 943 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 IL12RB1P42701 662 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 ANXA11P50995 505 aaKnown RBP14.33□□□□□ -0.11
DDX56-201ENST00000258772 SLAMF1Q13291 335 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 TPBGQ13641 420 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 GPAT3Q53EU6 434 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 TMEM35AQ53FP2 167 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 SLC27A4Q6P1M0 643 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 BHLHB9Q6PI77 547 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 XKRXQ6PP77 449 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 HSDL2Q6YN16 418 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 MRGPREQ86SM8 312 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 SDR16C5Q8N3Y7 309 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 RAB42Q8N4Z0 105 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 TTLQ8NG68 377 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 SFXN5Q8TD22 340 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 GATAD2BQ8WXI9 593 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 C1GALT1C1Q96EU7 318 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 RNFT2Q96EX2 444 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 CNRIP1Q96F85 164 aaPredicted RBP14.33□□□□□ -0.11
DDX56-201ENST00000258772 C16orf58Q96GQ5 468 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 DIRAS2Q96HU8 199 aa14.33□□□□□ -0.11
DDX56-201ENST00000258772 C12orf66Q96MD2 445 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms