RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LMF1Q96S06 567 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 SLC7A11Q9UPY5 501 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 PRDX3P30048 256 aaKnown RBP17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 RPS15P62841 145 aaKnown RBP17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 CACNA1FO60840 1977 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 VSTM2BA6NLU5 285 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 GNAO1P09471 354 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 NDUFV2P19404 249 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 MC3RP41968 323 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 EIF5AP63241 154 aaKnown RBP17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 EMC10Q5UCC4 262 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 NELL2Q99435 816 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 MGLLQ99685 303 aa17.77■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF850A8MQ14 1090 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 RHCEP18577 417 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 LCN1P31025 176 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 RORAP35398 523 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 SOX3P41225 446 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 FBXO27Q8NI29 283 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 EBF1Q9UH73 591 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 ZCWPW2A0A1B0GU75 182 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 RAD51DO75771 328 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 PROZP22891 400 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 CD40LGP29965 261 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 PTPRRQ15256 657 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 TBRG1Q3YBR2 411 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF367Q7RTV3 350 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 DPH1Q9BZG8 443 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 DKK3Q9UBP4 350 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 DLX2Q07687 328 aaPredicted RBP17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 CLCA4Q14CN2 919 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 C3orf33Q6P1S2 294 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 SMOXQ9NWM0 555 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 LIPT1Q9Y234 373 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 IGKV6D-21A0A0A0MT36 114 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 INMT-MINDY4F8WBC2 141 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 RBMXP38159 391 aaKnown RBP17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 ZSCAN1Q8NBB4 408 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 ELP5Q8TE02 316 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 CPNE2Q96FN4 548 aaPredicted RBP17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 FOXN4Q96NZ1 517 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 FAM189A1O60320 539 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 FESP07332 822 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 FBXO45P0C2W1 286 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC6A11P48066 632 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 PLXDC1Q8IUK5 500 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 PIANPQ8IYJ0 282 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 Q8N402 240 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 ARMC1Q9NVT9 282 aa17.76■□□□□ 0.43
SMARCC1-201ENST00000254480 A0A0A6YYC8 382 aaPredicted RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 I3L1I5 382 aaPredicted RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 MAN2B1O00754 1011 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 RDH16O75452 317 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 P04436 131 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 CTXN1P60606 82 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PIN1Q13526 163 aaPredicted RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 TUBA3CQ13748 450 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 EIF4HQ15056 248 aaKnown RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PAGE3Q5JUK9 113 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 HS3ST5Q8IZT8 346 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 TBC1D15Q8TC07 691 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 TUBA8Q9NY65 449 aaPredicted RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 RDH8Q9NYR8 311 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 ABCG2Q9UNQ0 655 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PHRF1Q9P1Y6 1649 aaKnown RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 RBBP9O75884 186 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 STEAP4Q687X5 459 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 ASRGL1Q7L266 308 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 RAB11FIP2Q7L804 512 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC5A8Q8N695 610 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 NEDD4LQ96PU5 975 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 MAN2C1Q9NTJ4 1040 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 USP36Q9P275 1121 aaKnown RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 SH3BGRL2Q9UJC5 107 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PROS1P07225 676 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 MOGQ16653 247 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PHC2Q8IXK0 858 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 GPR137CQ8N3F9 429 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PRR18Q8N4B5 295 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 TEX26Q8N6G2 289 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 TRMT10AQ8TBZ6 339 aaKnown RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 CD200R1Q8TD46 325 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 ASB15Q8WXK1 588 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 SAMD8Q96LT4 415 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 ZNF442Q9H7R0 627 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 B4GALT7Q9UBV7 327 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 GXYLT2A0PJZ3 443 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 S100A2P29034 98 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 NR4A3Q92570 626 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 SLC41A3Q96GZ6 507 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 CCNL2Q96S94 520 aaPredicted RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 ALOXE3Q9BYJ1 711 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PREBQ9HCU5 417 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 DNMT3AQ9Y6K1 912 aaPredicted RBP17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 NME4O00746 187 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 PVRP15151 417 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 AMY2BP19961 511 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 CNR2P34972 360 aa17.75■□□□□ 0.43
SMARCC1-201ENST00000254480 TCEAL1Q15170 157 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms