RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 GLYR1Q49A26 553 aaPredicted RBP15.33■□□□□ 0.04
LTBR-201ENST00000228918 KLHL22Q53GT1 634 aa15.33■□□□□ 0.04
LTBR-201ENST00000228918 ZNF517Q6ZMY9 492 aaPredicted RBP15.33■□□□□ 0.04
LTBR-201ENST00000228918 CLDN22Q8N7P3 220 aa15.33■□□□□ 0.04
LTBR-201ENST00000228918 PSD4Q8NDX1 1056 aa15.33■□□□□ 0.04
LTBR-201ENST00000228918 ZNF707Q96C28 371 aaPredicted RBP15.33■□□□□ 0.04
LTBR-201ENST00000228918 MIXL1Q9H2W2 232 aa15.33■□□□□ 0.04
LTBR-201ENST00000228918 CTPS2Q9NRF8 586 aa15.33■□□□□ 0.04
LTBR-201ENST00000228918 MRPS18AQ9NVS2 196 aaKnown RBP15.33■□□□□ 0.04
LTBR-201ENST00000228918 INSL6Q9Y581 213 aa15.33■□□□□ 0.04
LTBR-201ENST00000228918 SPIN1Q9Y657 262 aaPredicted RBP15.33■□□□□ 0.04
LTBR-201ENST00000228918 DNMT3AQ9Y6K1 912 aaPredicted RBP15.33■□□□□ 0.04
LTBR-201ENST00000228918 A0A1W2PQ09 198 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 A6NL46 340 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 C1QTNF3-AMACRE9PGA6 284 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 STK25O00506 426 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 CASC3O15234 703 aaKnown RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 GUCY1B2O75343 617 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 KRT8P05787 483 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 ACP2P11117 423 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 MYL12AP19105 171 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 GSTM3P21266 225 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 BUD31P41223 144 aaPredicted RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 HNRNPA0Q13151 305 aaKnown RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 SMUG1Q53HV7 270 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 PIP5KL1Q5T9C9 394 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 C22orf42Q6IC83 251 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 TMEM163Q8TC26 289 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 SPPL3Q8TCT6 385 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 SFXN5Q8TD22 340 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 RAB7BQ96AH8 199 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 BBS4Q96RK4 519 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 YIPF4Q9BSR8 244 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 FAIM2Q9BWQ8 316 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 MCOLN1Q9GZU1 580 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 EGLN3Q9H6Z9 239 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 ABCB9Q9NP78 766 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 FGF20Q9NP95 211 aaPredicted RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 PLEKHB1Q9UF11 243 aaPredicted RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 TMEM129A0AVI4 362 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 GLOD5A6NK44 160 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 C4orf51C9J302 202 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 AP3D1O14617 1153 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 PRODHO43272 600 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 CLEC2LP0C7M8 214 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 PRKAG1P54619 331 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 UBE3AQ05086 875 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 PRDX1Q06830 199 aaKnown RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 RAB40BQ12829 278 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 LASP1Q14847 261 aaKnown RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 WSCD2Q2TBF2 565 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 ATAD3CQ5T2N8 411 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 SLC36A4Q6YBV0 504 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 MRGPREQ86SM8 312 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 TM9SF4Q92544 642 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 TMEM203Q969S6 136 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 PINK1Q9BXM7 581 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 KLHL31Q9H511 634 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 TIGARQ9NQ88 270 aa15.32■□□□□ 0.04
LTBR-201ENST00000228918 YARS2Q9Y2Z4 477 aaKnown RBP15.32■□□□□ 0.04
LTBR-201ENST00000228918 FAM172BPA6NC97 362 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 IGLON5A6NGN9 336 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 NFATC1O95644 943 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 HMGN2P05204 90 aaKnown RBP15.31■□□□□ 0.04
LTBR-201ENST00000228918 TSPAN19P0C672 248 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 NR2F6P10588 404 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 ALPPL2P10696 532 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 ANXA11P50995 505 aaKnown RBP15.31■□□□□ 0.04
LTBR-201ENST00000228918 GNA13Q14344 377 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 MLF2Q15773 248 aaPredicted RBP15.31■□□□□ 0.04
LTBR-201ENST00000228918 PLK5Q496M5 336 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 TMEM35AQ53FP2 167 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 OR2G6Q5TZ20 316 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 LAPTM4BQ86VI4 370 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 RAB43Q86YS6 212 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 TTLQ8NG68 377 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 OR2A1Q8NGT9 310 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 RNFT2Q96EX2 444 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 FERD3LQ96RJ6 166 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 ZDHHC4Q9NPG8 344 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 SF3B6Q9Y3B4 125 aaKnown RBP15.31■□□□□ 0.04
LTBR-201ENST00000228918 A0A087WUU8 490 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 A0A0G2JPF8 293 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 IRGMA1A4Y4 181 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 HNRNPCL2B2RXH8 293 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 HNRNPCL3B7ZW38 293 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 ERAL1O75616 437 aaKnown RBP15.31■□□□□ 0.04
LTBR-201ENST00000228918 UBXN7O94888 489 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 APOL3O95236 402 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 STATHP02808 62 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 HNRNPCL4P0DMR1 293 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 IL12RB1P42701 662 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 SLC9A3P48764 834 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 RPS25P62851 125 aaKnown RBP15.31■□□□□ 0.04
LTBR-201ENST00000228918 DUSP2Q05923 314 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 ZIC1Q15915 447 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 DUSP6Q16828 381 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 UAP1L1Q3KQV9 507 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 FAM131AQ6UXB0 335 aa15.31■□□□□ 0.04
LTBR-201ENST00000228918 MEX3DQ86XN8 651 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms