RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Adgrl4Q923X1 739 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Srfbp1Q9CZ91 441 aaKnown RBP13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Mgat4cQ9D306 478 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Ovca2Q9D7E3 225 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 PrelpQ9JK53 378 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gm5538W4VSP6 401 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr1160A2AVT0 319 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Zfp708F8VPP0 541 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 TshrP47750 764 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 CtswP56203 371 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Cpne2P59108 548 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gng8P63078 70 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 P2rx3Q3UR32 397 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Ostm1Q8BGT0 338 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Lmo3Q8BZL8 145 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Emc1Q8C7X2 997 aaKnown RBP13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gtpbp3Q923K4 492 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Pink1Q99MQ3 580 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Slc9a3r2Q9JHL1 337 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 IghdA0A0A6YW14 291 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 A430033K04RikE9Q8G5 680 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gm3327F7C9A1 213 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Abcb1aP21447 1276 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Slc26a1P58735 704 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Pou2f2Q00196 463 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Arrdc3Q7TPQ9 414 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 DdnQ80TS7 710 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Supv3l1Q80YD1 779 aaKnown RBP13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Angptl6Q8R0Z6 457 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr380Q8VGT3 311 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 CrtapQ9CYD3 400 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Clec3aQ9EPW4 196 aa13.38□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Ech1O35459 327 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 FxnO35943 207 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Cd63P41731 238 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Rps26P62855 115 aaKnown RBP13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Hoxd13P70217 339 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 MagixQ4KL35 324 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Slc26a10Q5EBI0 492 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 SnupnQ80W37 358 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 FarsaQ8C0C7 508 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Treml1Q8K558 317 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Tram1l1Q8QZR0 363 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Mettl22Q8R1C6 393 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Swsap1Q8VCI7 278 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 SgtbQ8VD33 304 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr561Q8VGZ6 314 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 EtfdhQ921G7 616 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 March7Q9WV66 693 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Bcl2l11O54918 196 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 OtcP11725 354 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Sult4a1P63046 284 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 FcrlbQ5DRQ8 427 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Pwwp2aQ69Z61 730 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Nlgn2Q69ZK9 836 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Slc35f2Q7TML3 375 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Rhbdd3Q8BP97 385 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Esco2Q8CIB9 592 aaKnown RBP13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr836Q8VFJ3 317 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr1217Q8VGG1 304 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Pcdhac2Q91Y09 1006 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Steap1Q9CWR7 339 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gm5519D3Z175 170 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 LckP06240 509 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Tcte3P11985 191 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Hmgn1P18608 96 aaKnown RBP13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Pcsk2P21661 637 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Rfx3P48381 749 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Acta2P62737 377 aaKnown RBP13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Actg2P63268 376 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Krt33bQ61897 404 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 CstbQ62426 98 aaKnown RBP13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Fam155aQ8CCS2 467 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Zbtb20Q8K0L9 741 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr846Q8VET8 312 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Eps8l3Q91WL0 600 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Scgb2b3D2XZ38 112 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gm10719E9Q7T3 227 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Adam3F8VQ03 822 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gm19965J3QNY8 723 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Cer1O55233 272 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 P03987 398 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Timm8bP62077 83 aaKnown RBP13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 MroQ7TNB4 248 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Lactb2Q99KR3 288 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Necab3Q9D6J4 353 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Wdr76A6PWY4 622 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Gm10608E9PZ13 166 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Coq10aE9Q3H6 259 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr1471F6QVZ8 314 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Aff2O55112 1272 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Csn2P10598 231 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Bdkrb1Q61125 334 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Olfr834Q7TRG8 312 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Unc119bQ8C4B4 251 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Pdcd2lQ8C5N5 364 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Pla2g15Q8VEB4 412 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Rab3bQ9CZT8 219 aa13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 Upf1Q9EPU0 1124 aaKnown RBP13.37□□□□□ -0.27
Col3a1-201ENSMUST00000087883 BdnfP21237 249 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms