RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Mansc4Q3UU94 337 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Itgb2lQ3UV74 738 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Nudt6Q8CH40 313 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Vmn1r206Q8R277 312 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Ptcd2Q8R3K3 381 aaKnown RBP15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Zfyve21Q8VCM3 234 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr535Q8VGL3 312 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr586Q8VH13 317 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Ash2lQ91X20 623 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 TympQ99N42 471 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 AgtrapQ9WVK0 161 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Kcnk7Q9Z2T1 307 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Irs2P81122 1321 aa15.57■□□□□ 0.08
Shh-201ENSMUST00000002708 Dnajb3O35723 242 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Rpl6P47911 296 aaKnown RBP15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 GlaP51569 419 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Nell1Q2VWQ2 810 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Kbtbd8Q3UQV5 599 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Ifngr2Q63953 332 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Szrd1Q6NXN1 152 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Tm7sf2Q71KT5 418 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Q80Y39 304 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Zadh2Q8BGC4 377 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Ubash3bQ8BGG7 638 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Pphln1Q8K2H1 381 aaKnown RBP15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Colec12Q8K4Q8 742 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Uhrf1Q8VDF2 782 aaKnown RBP15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr572Q8VGZ3 318 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Oosp1Q925U0 202 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Tm9sf3Q9ET30 587 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Tmem201A2A8U2 664 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr619E9PV95 320 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr288E9Q1P2 318 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 S100a6P14069 89 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Timp2P25785 220 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 DctP29812 517 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Pcbp3P57722 371 aaKnown RBP15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Adra2aQ01338 450 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Gdf9Q07105 441 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Ugt2b36Q3UEP4 530 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Tlx2Q61663 284 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Sdc3Q64519 442 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr744Q7TRM0 323 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Zfp184Q7TSH9 737 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Adam29Q811Q4 763 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Mief1Q8BGV8 463 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Sall4Q8BX22 1067 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Mfsd6Q8CBH5 775 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 C1raQ8CG16 707 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Polr1eQ8K202 482 aaKnown RBP15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Agpat4Q8K4X7 378 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Stx19Q8R1Q0 292 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Sh3glb2Q8R3V5 400 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Akr1d1Q8VCX1 325 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr808Q8VGI8 312 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Gpr146Q99LE2 333 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Spata19Q9DAQ9 154 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 SrpraQ9DBG7 636 aaKnown RBP15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Alyref2Q9JJW6 218 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Lpar2Q9JL06 348 aa15.56■□□□□ 0.08
Shh-201ENSMUST00000002708 Atxn2O70305 1285 aaKnown RBP15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Rpl7P14148 270 aaKnown RBP15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Pou3f2P31360 445 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 ArntP53762 791 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Rps5P97461 204 aaKnown RBP15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 NrtnP97463 195 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Scrn3Q3TMH2 418 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Ctu2Q3U308 514 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Foxs1Q61574 329 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Mapre3Q6PER3 281 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr855Q7TRF8 312 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Samd7Q8C8Y5 445 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Ccm2Q8K2Y9 453 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Cd276Q8VE98 316 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Ift43Q9DA69 206 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Gpr88Q9EPB7 384 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Hspb3Q9QZ57 154 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Acox1Q9R0H0 661 aaKnown RBP15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Otud4B2RRE7 1107 aaKnown RBP15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Vmn2r95L7N274 845 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 GypaP14220 168 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 CatP24270 527 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 DcnP28654 354 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Slc6a12P31651 614 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Id2P41136 134 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 NcanP55066 1268 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Lman2lP59481 347 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Rad51Q08297 339 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Tmem38aQ3TMP8 298 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Ripk1Q60855 656 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Prkg2Q61410 762 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 PianpQ6P1B3 278 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Npsr1Q8BZP8 371 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Zbtb37Q8C3U9 504 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Rbm34Q8C5L7 375 aaKnown RBP15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Acot7Q91V12 381 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Tvp23bQ9D8T4 205 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Cdrt4Q9DA64 179 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Fbxl12Q9EPX5 326 aa15.55■□□□□ 0.08
Shh-201ENSMUST00000002708 Sema4gQ9WUH7 837 aa15.55■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms