RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 RCAN2Q14206 197 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 UAP1Q16222 522 aaPredicted RBP17.32■□□□□ 0.36
SMN2-215ENST00000628696 NNATQ16517 81 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 TIGD3Q6B0B8 471 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 KLC3Q6P597 504 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 L3MBTL4Q8NA19 623 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 OR1J4Q8NGS1 313 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 FBXO25Q8TCJ0 367 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 MBD6Q96DN6 1003 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 TMEM41AQ96HV5 264 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 YIPF4Q9BSR8 244 aa17.32■□□□□ 0.36
SMN2-215ENST00000628696 NXF5Q9H1B4 397 aaKnown RBP17.32■□□□□ 0.36
SMN2-215ENST00000628696 UTP11Q9Y3A2 253 aaKnown RBP17.32■□□□□ 0.36
SMN2-215ENST00000628696 TNPO3Q9Y5L0 923 aaKnown RBP17.32■□□□□ 0.36
SMN2-215ENST00000628696 FLNAP21333 2647 aaKnown RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 A0A096LPK6 155 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 C2orf72A6NCS6 295 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 MBD3L4A6NDZ8 208 aaPredicted RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 MBD3L3A6NE82 208 aaPredicted RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 MBD3L5A6NJ08 208 aaPredicted RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 SEMA3DO95025 777 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 KLHL2O95198 593 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 ABCB1P08183 1280 aaPredicted RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 CYP4B1P13584 511 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 CPMP14384 443 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 CCNG1P51959 295 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 NAGLUP54802 743 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 CAV1Q03135 178 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 TRADDQ15628 312 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 NHSL2Q5HYW2 709 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 CCNYL2Q5T2Q4 361 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 TTC19Q6DKK2 380 aaPredicted RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 DESI1Q6ICB0 168 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 CCDC91Q7Z6B0 441 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 MMP21Q8N119 569 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 C9orf106Q8NAJ2 232 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 FAM83FQ8NEG4 500 aaPredicted RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 OR7G1Q8NGA0 311 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 MBD3L2Q8NHZ7 208 aaPredicted RBP17.31■□□□□ 0.36
SMN2-215ENST00000628696 BRINP2Q9C0B6 783 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 CALHM2Q9HA72 323 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 AHSPQ9NZD4 102 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 BCAP29Q9UHQ4 241 aa17.31■□□□□ 0.36
SMN2-215ENST00000628696 CCDC189A1A4V9 331 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 PPM1BO75688 479 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 ATE1O95260 518 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 TMIGD3P0DMS9 266 aaPredicted RBP17.3■□□□□ 0.36
SMN2-215ENST00000628696 DRD2P14416 443 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 FOSL1P15407 271 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 PORP16435 677 aaPredicted RBP17.3■□□□□ 0.36
SMN2-215ENST00000628696 GPX3P22352 226 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 PTPN6P29350 595 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 TYK2P29597 1187 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 GCKP35557 465 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
SMN2-215ENST00000628696 SRYQ05066 204 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 POU4F3Q15319 338 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 DEFB113Q30KQ7 82 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 SGO1Q5FBB7 561 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 FAM111BQ6SJ93 734 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 PTGR2Q8N8N7 351 aaPredicted RBP17.3■□□□□ 0.36
SMN2-215ENST00000628696 C17orf47Q8NEP4 570 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 OR52B6Q8NGF0 335 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 MRPL1Q9BYD6 325 aaKnown RBP17.3■□□□□ 0.36
SMN2-215ENST00000628696 VPS11Q9H270 941 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 DLL4Q9NR61 685 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 DTX4Q9Y2E6 619 aa17.3■□□□□ 0.36
SMN2-215ENST00000628696 MED12LQ86YW9 2145 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 HMX2A2RU54 273 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 CLCA1A8K7I4 914 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 OR7A17O14581 309 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 CDH16O75309 829 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 ERN1O75460 977 aaKnown RBP17.29■□□□□ 0.36
SMN2-215ENST00000628696 ACTL6AO96019 429 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 S1PR1P21453 382 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 EXOSC7Q15024 291 aaKnown RBP17.29■□□□□ 0.36
SMN2-215ENST00000628696 FRG2Q64ET8 278 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 PAGE2Q7Z2X7 111 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 NUP54Q7Z3B4 507 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 WFDC11Q8NEX6 87 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 RDH11Q8TC12 318 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 ZPLD1Q8TCW7 415 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 PHF21BQ96EK2 531 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 GPR78Q96P69 363 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 FRG2BQ96QU4 278 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 NODALQ96S42 347 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 RBM24Q9BX46 236 aaKnown RBP17.29■□□□□ 0.36
SMN2-215ENST00000628696 RAB17Q9H0T7 212 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 SERHLQ9NQF3 203 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 KLRF1Q9NZS2 232 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 MAPRE3Q9UPY8 281 aa17.29■□□□□ 0.36
SMN2-215ENST00000628696 RPH3AQ9Y2J0 694 aaPredicted RBP17.29■□□□□ 0.36
SMN2-215ENST00000628696 H0Y3Z8 333 aa17.28■□□□□ 0.36
SMN2-215ENST00000628696 ICOSLGO75144 302 aa17.28■□□□□ 0.36
SMN2-215ENST00000628696 ERAL1O75616 437 aaKnown RBP17.28■□□□□ 0.36
SMN2-215ENST00000628696 IL18BPO95998 194 aa17.28■□□□□ 0.36
SMN2-215ENST00000628696 NAGAP17050 411 aa17.28■□□□□ 0.36
SMN2-215ENST00000628696 CNTFP26441 200 aa17.28■□□□□ 0.36
SMN2-215ENST00000628696 SOX18P35713 384 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms