RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 UBTD2Q8WUN7 234 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 SEPT8Q92599 483 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 RAB7BQ96AH8 199 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ULK4Q96C45 1275 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 NXPE2Q96DL1 559 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 VPS39Q96JC1 886 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 CXorf58Q96LI9 332 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 JPH2Q9BR39 696 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ERP44Q9BS26 406 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 THUMPD2Q9BTF0 503 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 CARD6Q9BX69 1037 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 MTIF3Q9H2K0 278 aaKnown RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 DPEP2Q9H4A9 486 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ZDHHC6Q9H6R6 413 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 C10orf88Q9H8K7 445 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ACTR8Q9H981 624 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ROPN1Q9HAT0 212 aaPredicted RBP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 POLE3Q9NRF9 147 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 YAE1D1Q9NRH1 226 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 AATFQ9NY61 560 aaKnown RBP eCLIP1.94□□□□□ -2.1
TARDBP-220ENST00000618606 COPS7AQ9UBW8 275 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ETV7Q9Y603 341 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 COLEC10Q9Y6Z7 277 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 ARID1AO14497 2285 aa1.94□□□□□ -2.1
TARDBP-220ENST00000618606 RNF123Q5XPI4 1314 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 SALL1Q9NSC2 1324 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 WI2-2373I1.2A0A1W2PRP0 233 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 E7ENQ6 273 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 SCO2O43819 266 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 IGHG1P01857 330 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 MT-ND2P03891 347 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 PROS1P07225 676 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 UMPSP11172 480 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CYP11B1P15538 503 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 ZNF18P17022 549 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CYP2F1P24903 491 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 PTPN4P29074 926 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CCND2P30279 289 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 NSFP46459 744 aaKnown RBP1.93□□□□□ -2.1
TARDBP-220ENST00000618606 ASMTP46597 345 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 IFNAR2P48551 515 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 HNMTP50135 292 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CCL11P51671 97 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 MTTPP55157 894 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 KCNK10P57789 538 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 FUT7Q11130 342 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 ITPK1Q13572 414 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 DPYSQ14117 519 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 TRADDQ15628 312 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 LTB4RQ15722 352 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CARTPTQ16568 116 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 POM121L1PQ3SYA9 428 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 LRRC37A5PQ49AS3 106 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 LIPKQ5VXJ0 399 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 DHRS11Q6UWP2 260 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 COX8CQ7Z4L0 72 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 LCA5Q86VQ0 697 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 GRAMD2AQ8IUY3 354 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 WDR49Q8IV35 697 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 UNC5CLQ8IV45 518 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CCDC60Q8IWA6 550 aaPredicted RBP1.93□□□□□ -2.1
TARDBP-220ENST00000618606 MINDY2Q8NBR6 621 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 GMCL1P1Q8NEA9 526 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 OR5M9Q8NGP3 310 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 GLYATL1Q969I3 302 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 BPIFA2Q96DR5 249 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 LURAP1Q96LR2 239 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 GPR137Q96N19 417 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 COQ7Q99807 217 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 SPAG8Q99932 426 aaPredicted RBP1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CRACR2AQ9BSW2 395 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 PAPOLGQ9BWT3 736 aaKnown RBP1.93□□□□□ -2.1
TARDBP-220ENST00000618606 LRRC2Q9BYS8 371 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 NACAP1Q9BZK3 213 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 ZNF665Q9H7R5 613 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 ECT2Q9H8V3 914 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 DDX28Q9NUL7 540 aaKnown RBP1.93□□□□□ -2.1
TARDBP-220ENST00000618606 TMOD2Q9NZR1 351 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 CHRNA9Q9UGM1 479 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 XPO7Q9UIA9 1087 aaKnown RBP1.93□□□□□ -2.1
TARDBP-220ENST00000618606 SPATA2Q9UM82 520 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 DUSP12Q9UNI6 340 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 RRP15Q9Y3B9 282 aaKnown RBP1.93□□□□□ -2.1
TARDBP-220ENST00000618606 NPC1L1Q9UHC9 1359 aa1.93□□□□□ -2.1
TARDBP-220ENST00000618606 A0A0U1RQV5 110 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 SH3PXD2BA1X283 911 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 H0YCG3 227 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 INPP4BO15327 924 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 CHADO15335 359 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 RIPK2O43353 540 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 B4GAT1O43505 415 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 SYT7O43581 403 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 SSX5O60225 188 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 SRPX2O60687 465 aaPredicted RBP1.92□□□□□ -2.1
TARDBP-220ENST00000618606 GRAP2O75791 330 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 OR6A2O95222 327 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 PRAMEF12O95522 483 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 APBB3O95704 486 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 CPNE6O95741 557 aa1.92□□□□□ -2.1
TARDBP-220ENST00000618606 YES1P07947 543 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms