RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PGAM5Q96HS1 289 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 TRBV2A0A0J9YWF9 115 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 AK4P27144 223 aaPredicted RBP16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 SOX2P48431 317 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 PON2Q15165 354 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 C15orf39Q6ZRI6 1047 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC16A9Q7RTY1 509 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 VTCN1Q7Z7D3 282 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 TMPRSS12Q86WS5 348 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 TEX26Q8N6G2 289 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 CHPT1Q8WUD6 406 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 ABCG5Q9H222 651 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 RAB11BQ15907 218 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 OR13J1Q8NGT2 312 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 DEFB126Q9BYW3 111 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 FAM86C1Q9NVL1 165 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 BEST1O76090 585 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 NFATC3Q12968 1075 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 TAS1R3Q7RTX0 852 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 ZSCAN1Q8NBB4 408 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 HERPUD2Q9BSE4 406 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 PITHD1Q9GZP4 211 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 MTHFD2LQ9H903 347 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 SUSD2Q9UGT4 822 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 SSX5O60225 188 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC18B1Q6NT16 456 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 PGAP3Q96FM1 320 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 METTL2AQ96IZ6 378 aaKnown RBP16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 NSUN5Q96P11 429 aaKnown RBP16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 PEAK1Q9H792 1746 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 BRF2Q9HAW0 419 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 GMEB2Q9UKD1 530 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 ARPC4-TTLL3A0A0A6YYG9 625 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 NAP1L6A6NFF2 107 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 THBS2P35442 1172 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 RAB41Q5JT25 222 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 MAMDC2Q7Z304 686 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC7A13Q8TCU3 470 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 RELTQ969Z4 430 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 SMOXQ9NWM0 555 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 STATHP02808 62 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 HYAL2Q12891 473 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 NKAPLQ5M9Q1 402 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 DPY19L3Q6ZPD9 716 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 CSNK1A1LQ8N752 337 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 GATA6Q92908 595 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 SH3YL1Q96HL8 342 aaPredicted RBP16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 ERVK13-1Q9NX77 482 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 HIF3AQ9Y2N7 669 aa16.6■□□□□ 0.25
HMGXB3-206ENST00000613459 CD8B2A6NJW9 211 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 FCER2P06734 321 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 STSP08842 583 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 CD8BP10966 210 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 SHFQ7M4L6 423 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 WDR53Q7Z5U6 358 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 OR13C3Q8NGS6 347 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 DEDD2Q8WXF8 326 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 LRR1Q96L50 414 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 KLHL15Q96M94 604 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 WDR77Q9BQA1 342 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 HCRTO43612 131 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 RNGTTO60942 597 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 OSMP13725 252 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 PTPRCAPQ14761 206 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 LRIT3Q3SXY7 679 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 TMEM173Q86WV6 379 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 GPR150Q8NGU9 434 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 OR8K3Q8NH51 312 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 ENPP4Q9Y6X5 453 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 LTN1O94822 1766 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 HBQ1P09105 142 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 CD34P28906 385 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 PYCR1P32322 319 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 MTNR1AP48039 350 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 KEAP1Q14145 624 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 CHDHQ8NE62 594 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 VRK1Q99986 396 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 BTNL2Q9UIR0 455 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 PCTPQ9UKL6 214 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 TRAPPC13A5PLN9 417 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 GLOD5A6NK44 160 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 A8MU76 341 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 H3BSH0 61 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 PAK4O96013 591 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 CYCSP99999 105 aaKnown RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 MEF2AQ02078 507 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 TCTE1Q5JU00 501 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 TMPPEQ6ZT21 453 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 CBARPQ8N350 705 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 IGSF8Q969P0 613 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 ECHDC3Q96DC8 303 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 GIMAP5Q96F15 307 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 FN3KQ9H479 309 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 ZNF701Q9NV72 531 aaPredicted RBP16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 FUOMA2VDF0 154 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 ZNF840PA6NDX5 716 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 MAN2B1O00754 1011 aa16.59■□□□□ 0.25
HMGXB3-206ENST00000613459 HLA-EP13747 358 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms