RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 TMEM41AQ96HV5 264 aa9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 SERPINI1Q99574 410 aa9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 BRINP2Q9C0B6 783 aa9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 UBQLN3Q9H347 655 aa9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 NOL11Q9H8H0 719 aaKnown RBP9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 CALHM2Q9HA72 323 aa9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 PSD3Q9NYI0 1048 aa9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 BCAP29Q9UHQ4 241 aa9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 TNPO3Q9Y5L0 923 aaKnown RBP9.65□□□□□ -0.86
CHMP2A-202ENST00000596708 C2orf72A6NCS6 295 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 MBD3L4A6NDZ8 208 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 MBD3L3A6NE82 208 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 MBD3L5A6NJ08 208 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 FOXE1O00358 373 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CDH16O75309 829 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 ERN1O75460 977 aaKnown RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 ATE1O95260 518 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 SIX3O95343 332 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CLDN9O95484 217 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 KLK1P06870 262 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 ABCB1P08183 1280 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 TMIGD3P0DMS9 266 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CPMP14384 443 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 PORP16435 677 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 ABCD3P28288 659 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 DEKP35659 375 aaKnown RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CPA2P48052 419 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CCNG1P51959 295 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 NAGLUP54802 743 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 SRYQ05066 204 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 C2orf54Q08AI8 447 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 NAB1Q13506 487 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 POU4F3Q15319 338 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 UAP1Q16222 522 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 NNATQ16517 81 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 DCST1Q5T197 706 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CCNYL2Q5T2Q4 361 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CCDC91Q7Z6B0 441 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CENPLQ8N0S6 344 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 L3MBTL4Q8NA19 623 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 C9orf106Q8NAJ2 232 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 FAM83FQ8NEG4 500 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 OR7G1Q8NGA0 311 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 MBD3L2Q8NHZ7 208 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 RDH11Q8TC12 318 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CDK15Q96Q40 435 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 RBM24Q9BX46 236 aaKnown RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 NXF5Q9H1B4 397 aaKnown RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 AHSPQ9NZD4 102 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 GRHL1Q9NZI5 618 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 CFL2Q9Y281 166 aa9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 RPH3AQ9Y2J0 694 aaPredicted RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 UTP11Q9Y3A2 253 aaKnown RBP9.64□□□□□ -0.87
CHMP2A-202ENST00000596708 A0A096LPK6 155 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 CLCA1A8K7I4 914 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 ERAL1O75616 437 aaKnown RBP9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 PPM1BO75688 479 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 SEMA3DO95025 777 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 KLHL2O95198 593 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 IL18BPO95998 194 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 ACTL6AO96019 429 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 NAGAP17050 411 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 GPX3P22352 226 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 PTPN6P29350 595 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 TYK2P29597 1187 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 SORDQ00796 357 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 CAV1Q03135 178 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 DESI1Q6ICB0 168 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 SLC30A6Q6NXT4 461 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 FAM111BQ6SJ93 734 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 ENPP6Q6UWR7 440 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 Q71RC1 249 aaPredicted RBP9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 PAGE2Q7Z2X7 111 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 NUP54Q7Z3B4 507 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 LUZP2Q86TE4 346 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 C17orf47Q8NEP4 570 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 WFDC11Q8NEX6 87 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 SPATA4Q8NEY3 305 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 OR14L1PQ8NHC6 308 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 FBXO25Q8TCJ0 367 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 ZPLD1Q8TCW7 415 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 PHF21BQ96EK2 531 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 NODALQ96S42 347 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 OSBPL11Q9BXB4 747 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 MRPL1Q9BYD6 325 aaKnown RBP9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 VPS11Q9H270 941 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 PLEKHF2Q9H8W4 249 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 NEUROD4Q9HD90 331 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 DLL4Q9NR61 685 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 KLRF1Q9NZS2 232 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 MAPRE3Q9UPY8 281 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 DTX4Q9Y2E6 619 aa9.63□□□□□ -0.87
CHMP2A-202ENST00000596708 RTTNQ86VV8 2226 aa9.62□□□□□ -0.87
CHMP2A-202ENST00000596708 CCDC189A1A4V9 331 aa9.62□□□□□ -0.87
CHMP2A-202ENST00000596708 C1orf226A1L170 272 aa9.62□□□□□ -0.87
CHMP2A-202ENST00000596708 GOLGA6L10A6NI86 522 aa9.62□□□□□ -0.87
CHMP2A-202ENST00000596708 H0Y3Z8 333 aa9.62□□□□□ -0.87
CHMP2A-202ENST00000596708 CASKO14936 926 aa9.62□□□□□ -0.87
CHMP2A-202ENST00000596708 SNPHO15079 494 aa9.62□□□□□ -0.87
CHMP2A-202ENST00000596708 ICOSLGO75144 302 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms