RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ASGR2P07307 311 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 HNRNPFP52597 415 aaKnown RBP17■□□□□ 0.31
ATPAF1-214ENST00000576409 SYT6Q5T7P8 510 aaPredicted RBP17■□□□□ 0.31
ATPAF1-214ENST00000576409 SERPINA12Q8IW75 414 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 YIPF7Q8N8F6 280 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 MOSPD2Q8NHP6 518 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 NEDD4LQ96PU5 975 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 VNN3Q9NY84 501 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 PSORS1C1Q9UIG5 152 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 A0A1W2PQ45 241 aaPredicted RBP17■□□□□ 0.31
ATPAF1-214ENST00000576409 A0A1W2PQY0 241 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 CLDN24A6NM45 220 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 SLC16A6O15403 523 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 CD3GP09693 182 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 TFPIP10646 304 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 ANXA3P12429 323 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF3P17036 446 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 LCN1P31025 176 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF852Q6ZMS4 543 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF782Q6ZMW2 699 aaPredicted RBP17■□□□□ 0.31
ATPAF1-214ENST00000576409 ASB11Q8WXH4 323 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 CCDC120Q96HB5 630 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 S100A13Q99584 98 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 BHLHE41Q9C0J9 482 aaPredicted RBP17■□□□□ 0.31
ATPAF1-214ENST00000576409 SLC6A13Q9NSD5 602 aa17■□□□□ 0.31
ATPAF1-214ENST00000576409 EXOSC1Q9Y3B2 195 aaKnown RBP17■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF879B4DU55 563 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 FLRT2O43155 660 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 MT-ND5P03915 603 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 MPC1LP0DKB6 136 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 JUNBP17275 347 aaPredicted RBP16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 CSNK1DP48730 415 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 ADAM8P78325 824 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 PON3Q15166 354 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 DEFB115Q30KQ5 88 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 ENPP7Q6UWV6 458 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 LNX2Q8N448 690 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 OR2T33Q8NG76 320 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 OSTF1Q92882 214 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 KXD1Q9BQD3 176 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 GRXCR2A6NFK2 248 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 GYPBP06028 91 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 PCGF2P35227 344 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 WNT4P56705 351 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 WASH2PQ6VEQ5 465 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 SLC46A3Q7Z3Q1 461 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 FOXRED2Q8IWF2 684 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF419Q96HQ0 510 aaPredicted RBP16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 EPYCQ99645 322 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 PCBD2Q9H0N5 130 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF225Q9UK10 706 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 FAM171A2A8MVW0 826 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 F8A1P23610 371 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 GRK6P43250 576 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 PSMA6P60900 246 aaKnown RBP16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 SIM1P81133 766 aaPredicted RBP16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 NUP43Q8NFH3 380 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 RPLP0P6Q8NHW5 317 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 WFDC5Q8TCV5 224 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 BCL7BQ9BQE9 202 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 SH3D21A4FU49 640 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 TEX46H3BTG2 121 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 EIF2DP41214 584 aaKnown RBP16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 PITPNAQ00169 270 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 NOGQ13253 232 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 FBXO15Q8NCQ5 510 aaPredicted RBP16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 PJA1Q8NG27 643 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 THEM6Q8WUY1 208 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF480Q8WV37 535 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 SAMD8Q96LT4 415 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 DPH7Q9BTV6 452 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 OR10A4Q9H209 315 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 LTBP3Q9NS15 1303 aa16.99■□□□□ 0.31
ATPAF1-214ENST00000576409 DNAJC13O75165 2243 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 RCBTB2O95199 551 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 CPNE6O95741 557 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 SOD2P04179 222 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 AHRP35869 848 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF234Q14588 700 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF805Q5CZA5 627 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 PDZD3Q86UT5 571 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 ADAD1Q96M93 576 aaKnown RBP16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 LHX3Q9UBR4 397 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 METTL15A6NJ78 407 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 B3GALT2O43825 422 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 B4GALT2O60909 372 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 ARL6IP5O75915 188 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 NFATC1O95644 943 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 S100A9P06702 114 aaKnown RBP16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 HSD3B1P14060 373 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 VAMP1P23763 118 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 HSD3B2P26439 372 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 POU4F3Q15319 338 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 ZNF248Q8NDW4 579 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 TRIM43Q96BQ3 446 aaPredicted RBP16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 MS4A4AQ96JQ5 239 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 C5orf34Q96MH7 638 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 COLEC10Q9Y6Z7 277 aa16.98■□□□□ 0.31
ATPAF1-214ENST00000576409 APOC3P02656 99 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms