RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 TP53INP1Q96A56 240 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 NTNG2Q96CW9 530 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 UBXN10Q96LJ8 280 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 NODALQ96S42 347 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 RBBP8Q99708 897 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 G6PC3Q9BUM1 346 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 SFXN3Q9BWM7 321 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 NXF5Q9H1B4 397 aaKnown RBP14.09□□□□□ -0.15
PALB2-205ENST00000567003 OR10A5Q9H207 317 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 METTL7AQ9H8H3 244 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 LYARQ9NX58 379 aaKnown RBP14.09□□□□□ -0.15
PALB2-205ENST00000567003 EHD3Q9NZN3 535 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 TESMINQ9Y4I5 508 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 WIF1Q9Y5W5 379 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 ROS1P08922 2347 aa14.09□□□□□ -0.15
PALB2-205ENST00000567003 INAFM1C9JVW0 142 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 SNPHO15079 494 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 ARHGEF9O43307 516 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 ABCB1P08183 1280 aaPredicted RBP14.08□□□□□ -0.16
PALB2-205ENST00000567003 EPB42P16452 691 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 GPX3P22352 226 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 TCEA1P23193 301 aaKnown RBP14.08□□□□□ -0.16
PALB2-205ENST00000567003 CNTFP26441 200 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 ABCD3P28288 659 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 PTGDSP41222 190 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 PIK3CGP48736 1102 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 STARP49675 285 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 TMED10P49755 219 aaKnown RBP14.08□□□□□ -0.16
PALB2-205ENST00000567003 RAB10P61026 200 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 MRPS25P82663 173 aaKnown RBP14.08□□□□□ -0.16
PALB2-205ENST00000567003 PCDH1Q08174 1060 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 KBTBD12Q3ZCT8 623 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 ISCA2Q86U28 154 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 PERPQ96FX8 193 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 ATOH8Q96SQ7 321 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 SECISBP2Q96T21 854 aaKnown RBP14.08□□□□□ -0.16
PALB2-205ENST00000567003 CENPKQ9BS16 269 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 UBTD1Q9HAC8 227 aa14.08□□□□□ -0.16
PALB2-205ENST00000567003 EIF3LQ9Y262 564 aaKnown RBP14.08□□□□□ -0.16
PALB2-205ENST00000567003 SONP18583 2426 aaKnown RBP14.07□□□□□ -0.16
PALB2-205ENST00000567003 DSCAMO60469 2012 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 HEATR5AQ86XA9 2040 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 FAM171A2A8MVW0 826 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 CES2O00748 559 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 CASKO14936 926 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 RCBTB2O95199 551 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 ACTL6AO96019 429 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 KRT15P19012 456 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 NT5EP21589 574 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 GALNSP34059 522 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 PIK3CBP42338 1070 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 NEK2P51955 445 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 NRG3P56975 720 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 FUT7Q11130 342 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 OR52E8Q6IFG1 317 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 YTHDF3Q7Z739 585 aaKnown RBP14.07□□□□□ -0.16
PALB2-205ENST00000567003 SIMC1Q8NDZ2 872 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 OR14L1PQ8NHC6 308 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 HGDQ93099 445 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 PIGQQ9BRB3 760 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 REPIN1Q9BWE0 567 aaKnown RBP14.07□□□□□ -0.16
PALB2-205ENST00000567003 OSBPL11Q9BXB4 747 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 DDX31Q9H8H2 851 aaKnown RBP14.07□□□□□ -0.16
PALB2-205ENST00000567003 WDR41Q9HAD4 459 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 KLHL28Q9NXS3 571 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 TXNDC16Q9P2K2 825 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 CLCF1Q9UBD9 225 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 ADGRE2Q9UHX3 823 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 ADAM21Q9UKJ8 722 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 SNX24Q9Y343 169 aa14.07□□□□□ -0.16
PALB2-205ENST00000567003 DEFB108AA8MXU0 73 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 KERAO60938 352 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 ICOSLGO75144 302 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 PPM1BO75688 479 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 CPN1P15169 458 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 PTX3P26022 381 aaPredicted RBP14.06□□□□□ -0.16
PALB2-205ENST00000567003 PIK3R1P27986 724 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 GP5P40197 560 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 RPP38P78345 283 aaKnown RBP14.06□□□□□ -0.16
PALB2-205ENST00000567003 FAM27E3Q08E93 113 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 SLMAPQ14BN4 828 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 EXOSC7Q15024 291 aaKnown RBP14.06□□□□□ -0.16
PALB2-205ENST00000567003 CPSF6Q16630 551 aaKnown RBP eCLIP14.06□□□□□ -0.16
PALB2-205ENST00000567003 FAM111BQ6SJ93 734 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 RAPH1Q70E73 1250 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 ADGRE4PQ86SQ3 457 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 TRIM42Q8IWZ5 723 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 STAG3L4Q8TBR4 150 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 PIK3IP1Q96FE7 263 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 WFIKKN1Q96NZ8 548 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 CCL19Q99731 98 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 TM9SF2Q99805 663 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 CPNE1Q99829 537 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 ITPAQ9BY32 194 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 OR2B2Q9GZK3 357 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 ACTR8Q9H981 624 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 SAYSD1Q9NPB0 183 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 KLRF1Q9NZS2 232 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 RNF11Q9Y3C5 154 aa14.06□□□□□ -0.16
PALB2-205ENST00000567003 ANGPTL3Q9Y5C1 460 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms