RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PHACTR1Q9C0D0 580 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 ADAM19Q9H013 955 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 IARS2Q9NSE4 1012 aaKnown RBP12.44□□□□□ -0.42
PRPF39-204ENST00000553605 IKZF3Q9UKT9 509 aa12.44□□□□□ -0.42
PRPF39-204ENST00000553605 SYCE3A1L190 88 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 ABCD3P28288 659 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 SSTR4P31391 388 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 PTGDSP41222 190 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 PGGT1BP53609 377 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 FAPQ12884 760 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 TBX2Q13207 712 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-204ENST00000553605 SLAMF1Q13291 335 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 BCL2A1Q16548 175 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 CCNG2Q16589 344 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 KCTD19Q17RG1 926 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-204ENST00000553605 AP5B1Q2VPB7 878 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 DESI1Q6ICB0 168 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 TMEM81Q6P7N7 255 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 MEX3DQ86XN8 651 aaKnown RBP12.43□□□□□ -0.42
PRPF39-204ENST00000553605 C2CD4AQ8NCU7 369 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-204ENST00000553605 OR10H5Q8NGA6 315 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 FIG4Q92562 907 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 ADIPOR1Q96A54 375 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 HES6Q96HZ4 224 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 VPS39Q96JC1 886 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 OSBPL11Q9BXB4 747 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 CAPS2Q9BXY5 557 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 GALNT9Q9HCQ5 603 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 MS4A12Q9NXJ0 267 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 RNF115Q9Y4L5 304 aa12.43□□□□□ -0.42
PRPF39-204ENST00000553605 EPN1Q9Y6I3 576 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-204ENST00000553605 A0A1W2PP18 115 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 CLOCKO15516 846 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 SCELO95171 688 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 DPP4P27487 766 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 GABRB3P28472 473 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 SRD5A2P31213 254 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 HNMTP50135 292 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 SNTA1Q13424 505 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 C18orf21Q32NC0 220 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-204ENST00000553605 C18orf63Q68DL7 685 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 STAC2Q6ZMT1 411 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 NUP54Q7Z3B4 507 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 PDLIM5Q96HC4 596 aaKnown RBP12.42□□□□□ -0.42
PRPF39-204ENST00000553605 NODALQ96S42 347 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 NTMT1Q9BV86 223 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 RNF122Q9H9V4 155 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 KLRF1Q9NZS2 232 aa12.42□□□□□ -0.42
PRPF39-204ENST00000553605 YLPM1P49750 1951 aaKnown RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 PRKRAO75569 313 aaKnown RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 PPM1BO75688 479 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 IPO7O95373 1038 aaKnown RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 GPR75O95800 540 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 TGP01266 2768 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 AHSGP02765 367 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 ZNF16P17020 682 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 NAGAP17050 411 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 EGR1P18146 543 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 TLX1P31314 330 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 GALNSP34059 522 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 SSR2P43308 183 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 CDKL1Q00532 357 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 SQLEQ14534 574 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 CYP1B1Q16678 543 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 ALKBH2Q6NS38 261 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 DRICH1Q6PGQ1 229 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 GPR180Q86V85 440 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 UBQLNLQ8IYU4 475 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 NEUROG1Q92886 237 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 HGDQ93099 445 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 C11orf24Q96F05 449 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 MS4A8Q9BY19 250 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 ACTR6Q9GZN1 396 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 EHD1Q9H4M9 534 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 PRM3Q9NNZ6 103 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 PLSCR4Q9NRQ2 329 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 GPRC5BQ9NZH0 403 aa12.41□□□□□ -0.42
PRPF39-204ENST00000553605 REXO2Q9Y3B8 237 aaKnown RBP12.41□□□□□ -0.42
PRPF39-204ENST00000553605 WASHC1A8K0Z3 465 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 SAP18O00422 153 aaKnown RBP12.4□□□□□ -0.42
PRPF39-204ENST00000553605 CLGNO14967 610 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 PRAMEF4O60810 478 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 SH3BGRLO75368 114 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 TNFRSF21O75509 655 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 CCDC175P0C221 793 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 IGHV4-31P0DP07 118 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 MLNP12872 115 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 PEPDP12955 493 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 TCEA1P23193 301 aaKnown RBP12.4□□□□□ -0.42
PRPF39-204ENST00000553605 IGFBP5P24593 272 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 NUDT6P53370 316 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 EEFSECP57772 596 aaKnown RBP12.4□□□□□ -0.42
PRPF39-204ENST00000553605 DSCR9P59020 149 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 TNFRSF17Q02223 184 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 NRF1Q16656 503 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 PGGHGQ32M88 737 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 TMEM35AQ53FP2 167 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
PRPF39-204ENST00000553605 PRAMEF9Q5VWM5 478 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms