RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 DESI1Q6ICB0 168 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 GRHL2Q6ISB3 625 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 GALNT12Q8IXK2 581 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 OR14L1PQ8NHC6 308 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 RDH11Q8TC12 318 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 ADIPOR1Q96A54 375 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 PIK3IP1Q96FE7 263 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 ZFP3Q96NJ6 502 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 PIP5K1AQ99755 562 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 ZNF717Q9BY31 904 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 TRIM31Q9BZY9 425 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 OR10A5Q9H207 317 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 WDR41Q9HAD4 459 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 GALNT9Q9HCQ5 603 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SERHLQ9NQF3 203 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 RYDENQ9NUL5 291 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 LYARQ9NX58 379 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 ADAM21Q9UKJ8 722 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 PACSIN3Q9UKS6 424 aa12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
SMARCA4-206ENST00000538456 ROS1P08922 2347 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 A8MXE2 369 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 CXorf49A8MYA2 514 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 K7EPI3 171 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 UBXN8O00124 270 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 SMNDC1O75940 238 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 ABCB1P08183 1280 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 CPN1P15169 458 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 GALNSP34059 522 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 PIK3CBP42338 1070 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 FAM27E3Q08E93 113 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 OR52E8Q6IFG1 317 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 MRM1Q6IN84 353 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 LRRC8AQ8IWT6 810 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 KLHL7Q8IXQ5 586 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 ZBED8Q8IZ13 594 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 ZNF615Q8N8J6 731 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 WNT2BQ93097 391 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 NTNG2Q96CW9 530 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 G6PC3Q9BUM1 346 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 OSBPL11Q9BXB4 747 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 NXF5Q9H1B4 397 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 ACBD3Q9H3P7 528 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 PIGMQ9H3S5 423 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 NUDT4Q9NZJ9 180 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 EHD3Q9NZN3 535 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 KLRF1Q9NZS2 232 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 TXNDC16Q9P2K2 825 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 TRPS1Q9UHF7 1281 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 DTX4Q9Y2E6 619 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 WIF1Q9Y5W5 379 aa12.73□□□□□ -0.37
SMARCA4-206ENST00000538456 DEFB108AA8MXU0 73 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 PGRMC2O15173 223 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 CTIFO43310 598 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 NT5EP21589 574 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 GPX3P22352 226 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 TCEA1P23193 301 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 CNTFP26441 200 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 PIK3R1P27986 724 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 BSGP35613 385 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 STARP49675 285 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 DR1Q01658 176 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 FUT7Q11130 342 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 ACKR1Q16570 336 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 C6orf163Q5TEZ5 329 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 ENPP6Q6UWR7 440 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 PRSS57Q6UWY2 283 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 ADGRE4PQ86SQ3 457 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 IFNEQ86WN2 208 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 GRAMD2AQ8IUY3 354 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 TRIM42Q8IWZ5 723 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 SLC35F6Q8N357 371 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 TEX9Q8N6V9 391 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 SPATA3Q8NHX4 192 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 STAG3L4Q8TBR4 150 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 UBTD2Q8WUN7 234 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 UBXN10Q96LJ8 280 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 WFIKKN1Q96NZ8 548 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 FAM111AQ96PZ2 611 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 NODALQ96S42 347 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 GPR22Q99680 433 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 PIGQQ9BRB3 760 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 CLCF1Q9UBD9 225 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 FETUBQ9UGM5 382 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 SNX12Q9UMY4 172 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 ANGPTL3Q9Y5C1 460 aa12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 RAI1Q7Z5J4 1906 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-206ENST00000538456 CHD3Q12873 2000 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 A0A1W2PNV4 684 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 TP73O15350 636 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 ICOSLGO75144 302 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 CDH16O75309 829 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 PPM1BO75688 479 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 TNFSF13O75888 250 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 SEC31AO94979 1220 aaKnown RBP12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 FPR1P21462 350 aa12.71□□□□□ -0.37
SMARCA4-206ENST00000538456 PTX3P26022 381 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms