RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PWWP2BQ6NUJ5 590 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TCTN3Q6NUS6 607 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 FBXO42Q6P3S6 717 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GK5Q6ZS86 529 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SSX8Q7RTT4 187 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF761Q86XN6 746 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SPACA3Q8IXA5 215 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GALNT12Q8IXK2 581 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF440Q8IYI8 595 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 LRRC25Q8N386 305 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CDYL2Q8N8U2 506 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 HUS1BQ8NHY5 278 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NUBPLQ8TB37 319 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZCCHC10Q8TBK6 192 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF675Q8TD23 568 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NR4A3Q92570 626 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TMCO6Q96DC7 493 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MS4A6EQ96DS6 147 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PWWP2AQ96N64 755 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GPR78Q96P69 363 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SMAD5Q99717 465 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SH3GL2Q99962 352 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 UTP23Q9BRU9 249 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM79Q9BSE2 394 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 G6PC3Q9BUM1 346 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SLC25A23Q9BV35 468 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GATA5Q9BWX5 397 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GRIP2Q9C0E4 1043 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 REEP4Q9H6H4 257 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 OCIAD1Q9NX40 245 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GPR83Q9NYM4 423 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CNIH4Q9P003 139 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KIF17Q9P2E2 1029 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CYB5R1Q9UHQ9 305 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 YARS2Q9Y2Z4 477 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PCDHGA10Q9Y5H3 936 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PCDHA9Q9Y5H5 950 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SPIN1Q9Y657 262 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SESN1Q9Y6P5 492 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RALGAPA1Q6GYQ0 2036 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 LOC102723996A0A087X1L8 192 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 A6NL46 340 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 FOXO6A8MYZ6 492 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KLRC4-KLRK1H3BQV0 150 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ERN1O75460 977 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 OR4F21O95013 312 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 EML2O95834 649 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 C1QAP02745 245 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GUSBP08236 651 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 HOXB3P14651 431 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ITGA3P26006 1051 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MSX1P28360 303 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 OTX2P32243 289 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 S100A3P33764 101 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PTGER4P35408 488 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MRPL19P49406 292 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RPS13P62277 151 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 S100A12P80511 92 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KLRB1Q12918 225 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TRAF3Q13114 568 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KCNAB2Q13303 367 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MFAP5Q13361 173 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ODF1Q14990 250 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MLC1Q15049 377 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NSDHLQ15738 373 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NKG7Q16617 165 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CMPK2Q5EBM0 449 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 COLEC12Q5KU26 742 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 C1orf185Q5T7R7 199 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 CPTPQ5TA50 214 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 KANK2Q63ZY3 851 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 C16orf46Q6P387 395 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM205Q6UW68 189 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TMEM64Q6YI46 380 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 HSDL2Q6YN16 418 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NLRC3Q7RTR2 1065 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PATL1Q86TB9 770 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 STX12Q86Y82 276 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ELMOD2Q8IZ81 293 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MIER2Q8N344 545 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ACOT4Q8N9L9 421 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 ZNF680Q8NEM1 530 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 FBXO27Q8NI29 283 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TWIST2Q8WVJ9 160 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RASSF5Q8WWW0 418 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TTC9Q92623 222 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RNF145Q96MT1 663 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 RILPQ96NA2 401 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 PHOX2BQ99453 314 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 WDR77Q9BQA1 342 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NEURL2Q9BR09 285 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 NUDT16L1Q9BRJ7 211 aaKnown RBP3.36□□□□□ -1.87
PTPN22-211ENST00000538253 MARCH7Q9H992 704 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 Q9N2J8 555 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 BRD7Q9NPI1 651 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SACM1LQ9NTJ5 587 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 GIN1Q9NXP7 522 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 TAS2R9Q9NYW1 312 aa3.36□□□□□ -1.87
PTPN22-211ENST00000538253 SUCOQ9UBS9 1254 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms