RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TP63Q9H3D4 680 aaPredicted RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 ZFP64Q9NPA5 681 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 TIMM22Q9Y584 194 aa12.92□□□□□ -0.34
SF3B2-215ENST00000534307 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.92□□□□□ -0.34
SF3B2-215ENST00000534307 C19orf84I3L1E1 186 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 AQP7O14520 342 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 PCDH7O60245 1069 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 SUSD5O60279 629 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
SF3B2-215ENST00000534307 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
SF3B2-215ENST00000534307 CBX7O95931 251 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 MYL2P10916 166 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 ENDOUP21128 410 aaKnown RBP12.91□□□□□ -0.34
SF3B2-215ENST00000534307 NAGLUP54802 743 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 FBXW4P57775 412 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 HMGCS1Q01581 520 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 LTB4RQ15722 352 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 CCDC153Q494R4 210 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 GXYLT1Q4G148 440 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 SPIN4Q56A73 249 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 FAM180BQ6P0A1 224 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 FAM13CQ8NE31 585 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 RDH11Q8TC12 318 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 SPPL2AQ8TCT8 520 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 KLHL29Q96CT2 875 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 LURAP1Q96LR2 239 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 SMC6Q96SB8 1091 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 SECISBP2Q96T21 854 aaKnown RBP12.91□□□□□ -0.34
SF3B2-215ENST00000534307 NXF5Q9H1B4 397 aaKnown RBP12.91□□□□□ -0.34
SF3B2-215ENST00000534307 C12orf65Q9H3J6 166 aaKnown RBP12.91□□□□□ -0.34
SF3B2-215ENST00000534307 TNFRSF12AQ9NP84 129 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 MID1IP1Q9NPA3 183 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 PNPLA3Q9NST1 481 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 UTS2RQ9UKP6 389 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 BOKQ9UMX3 212 aaPredicted RBP12.91□□□□□ -0.34
SF3B2-215ENST00000534307 DLGAP4Q9Y2H0 992 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 NPFFR2Q9Y5X5 522 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 NINQ8N4C6 2090 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 ABCA2Q9BZC7 2435 aa12.91□□□□□ -0.34
SF3B2-215ENST00000534307 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 NPIPA2E9PIF3 369 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 NPIPA3F8WFD2 350 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 BCKDKO14874 412 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 HCN1O60741 890 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 CDH16O75309 829 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ATP6AP2O75787 350 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 LRATO95237 230 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 IL3P08700 152 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 DRD2P14416 443 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 KRT15P19012 456 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 TIA1P31483 386 aaKnown RBP eCLIP12.9□□□□□ -0.34
SF3B2-215ENST00000534307 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
SF3B2-215ENST00000534307 CCT5P48643 541 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 EMDP50402 254 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 NAA20P61599 178 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 KCNJ2P63252 427 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 SLC18A2Q05940 514 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ACSM2AQ08AH3 577 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 EXOSC7Q15024 291 aaKnown RBP12.9□□□□□ -0.34
SF3B2-215ENST00000534307 CEBPEQ15744 281 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 TRMT12Q53H54 448 aaKnown RBP12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ZNF628Q5EBL2 1059 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 TBCELQ5QJ74 424 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 FNDC7Q5VTL7 733 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ACSM2BQ68CK6 577 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 TRIM46Q7Z4K8 759 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 CCNYL1Q8N7R7 359 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ADCY4Q8NFM4 1077 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ZNF675Q8TD23 568 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 POM121Q96HA1 1249 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ITPAQ9BY32 194 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 BRINP2Q9C0B6 783 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 ACKR4Q9NPB9 350 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 OXSMQ9NWU1 459 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 QPCTLQ9NXS2 382 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 SPRR3Q9UBC9 169 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 PSME2Q9UL46 239 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 GRID1Q9ULK0 1009 aa12.9□□□□□ -0.34
SF3B2-215ENST00000534307 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 SMIM23A6NLE4 172 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 CAPN14A8MX76 684 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 H3BQF6 201 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 ABCB1P08183 1280 aaPredicted RBP12.89□□□□□ -0.35
SF3B2-215ENST00000534307 PCSK2P16519 638 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 KRT4P19013 534 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 ABCD3P28288 659 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 PTGER4P35408 488 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 KIR3DL1P43629 444 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 GSTM5P46439 218 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 ALDH9A1P49189 494 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 TMED10P49755 219 aaKnown RBP12.89□□□□□ -0.35
SF3B2-215ENST00000534307 C6orf163Q5TEZ5 329 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 HLA-DQA1Q5Y7H0 255 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 RTL6Q6ICC9 239 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 TMEM211Q6ICI0 200 aa12.89□□□□□ -0.35
SF3B2-215ENST00000534307 SCIMPQ6UWF3 145 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms